Variant report

Variant	rs17832366
Chromosome Location	chr6:131217024-131217025
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10499177	0.84[CEU][hapmap];0.87[TSI][hapmap];0.85[EUR][1000 genomes]
rs12527605	0.91[CEU][hapmap]
rs12528626	0.91[CEU][hapmap];0.84[EUR][1000 genomes]
rs12529894	0.91[CEU][hapmap]
rs12663183	0.84[CEU][hapmap]
rs17059678	0.84[CEU][hapmap];0.87[TSI][hapmap]
rs17059736	0.84[CEU][hapmap]
rs17059852	0.91[CEU][hapmap]
rs2020972	1.00[AMR][1000 genomes]
rs3777452	0.91[CEU][hapmap];0.89[EUR][1000 genomes]
rs3798251	0.84[CEU][hapmap];0.82[TSI][hapmap];0.81[EUR][1000 genomes]
rs6941909	0.89[CEU][hapmap]
rs73000272	0.89[EUR][1000 genomes]
rs9321258	0.81[EUR][1000 genomes]
rs9483193	0.81[EUR][1000 genomes]
rs9483194	0.84[EUR][1000 genomes]
rs9492759	0.81[EUR][1000 genomes]
rs9492762	0.91[CEU][hapmap];0.82[TSI][hapmap];0.84[EUR][1000 genomes]

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:131159000-131229000	Weak transcription	Colonic Mucosa	Colon
2	chr6:131170400-131217400	Weak transcription	Psoas Muscle	Psoas
3	chr6:131171200-131223200	Weak transcription	Right Ventricle	heart
4	chr6:131171400-131220200	Weak transcription	Fetal Brain Male	brain
5	chr6:131175000-131222400	Weak transcription	Skeletal Muscle Male	skeletal muscle
6	chr6:131175600-131221600	Weak transcription	Rectal Smooth Muscle	rectum
7	chr6:131179400-131222400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr6:131187000-131223200	Weak transcription	Gastric	stomach
9	chr6:131190400-131227000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr6:131190800-131224200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:131191000-131234400	Weak transcription	Esophagus	oesophagus
12	chr6:131191200-131224200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr6:131191200-131233000	Weak transcription	Spleen	Spleen
14	chr6:131194200-131222000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr6:131195800-131224200	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr6:131198600-131224200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
17	chr6:131201000-131222400	Strong transcription	Dnd41	blood
18	chr6:131201800-131222000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr6:131203600-131234200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr6:131204400-131228600	Weak transcription	Stomach Mucosa	stomach
21	chr6:131205200-131222000	Weak transcription	A549	lung
22	chr6:131208000-131222000	Weak transcription	Skeletal Muscle Female	skeletal muscle
23	chr6:131209000-131234000	Weak transcription	Fetal Thymus	thymus
24	chr6:131209200-131219600	Weak transcription	Fetal Heart	heart
25	chr6:131209600-131222000	Weak transcription	HMEC	breast
26	chr6:131209800-131228000	Weak transcription	HUVEC	blood vessel
27	chr6:131210600-131217800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr6:131210800-131222400	Strong transcription	HepG2	liver
29	chr6:131211000-131228400	Weak transcription	Small Intestine	intestine
30	chr6:131211200-131222000	Weak transcription	NHEK	skin
31	chr6:131211200-131234000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr6:131211400-131224000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
33	chr6:131211400-131234200	Weak transcription	Primary hematopoietic stem cells	blood
34	chr6:131211600-131219600	Weak transcription	Duodenum Mucosa	Duodenum
35	chr6:131211800-131219600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr6:131212000-131224600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
37	chr6:131212200-131220200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr6:131212200-131221800	Weak transcription	NH-A	brain
39	chr6:131212200-131222000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr6:131212600-131218200	Strong transcription	Fetal Intestine Large	intestine
41	chr6:131213400-131217200	Strong transcription	Primary B cells from cord blood	blood
42	chr6:131213400-131217400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr6:131213400-131223400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
44	chr6:131213600-131232200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
45	chr6:131214400-131218800	Strong transcription	Duodenum Smooth Muscle	Duodenum
46	chr6:131215000-131217400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr6:131215000-131219600	Weak transcription	Primary B cells from peripheral blood	blood
48	chr6:131215000-131224200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr6:131215000-131228800	Weak transcription	Liver	Liver
50	chr6:131215200-131222000	Weak transcription	H9 Cell Line	embryonic stem cell

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