Variant report

Variant	rs2374424
Chromosome Location	chr11:83187113-83187114
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83162357..83164289-chr11:83184608..83187226,3	K562	blood:

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1075718	0.81[AMR][1000 genomes]
rs10792686	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10898126	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10898127	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10898129	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11233632	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11233649	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11607886	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12294291	0.80[ASN][1000 genomes]
rs1347008	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1367981	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1367982	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1469609	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1469610	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1864774	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1897372	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2009715	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3815986	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3815987	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4341564	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6592116	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6592117	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6592119	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7131385	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7927629	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7948931	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs919667	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs958246	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83183600-83192000	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr11:83183800-83191000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr11:83183800-83191200	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83185600-83187600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr11:83186800-83187200	Enhancers	Brain Substantia Nigra	brain
6	chr11:83186800-83187400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr11:83186800-83187400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr11:83187000-83187400	Enhancers	Cortex derived primary cultured neurospheres	brain
9	chr11:83187000-83187400	Enhancers	Brain Anterior Caudate	brain
10	chr11:83187000-83187400	Enhancers	Brain Cingulate Gyrus	brain
11	chr11:83187000-83187600	Enhancers	Brain Angular Gyrus	brain
12	chr11:83187000-83187600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
13	chr11:83187000-83187600	Enhancers	Fetal Lung	lung

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