The 2.0 version of rSNPBase

Variant report

Variant rs2505938
Chromosome Location chr6:80845754-80845755
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80817000-80852800 Weak transcription Psoas Muscle Psoas
2 chr6:80818000-80861400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:80818000-80866000 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr6:80829400-80852000 Weak transcription Fetal Stomach stomach
5 chr6:80836200-80852800 Weak transcription Right Ventricle heart
6 chr6:80836400-80855800 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr6:80836400-80863000 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr6:80836400-80891200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr6:80836600-80846800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr6:80836600-80852800 Weak transcription Pancreas Pancrea
11 chr6:80836800-80846000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr6:80837000-80852600 Weak transcription Duodenum Mucosa Duodenum
13 chr6:80837000-80853000 Weak transcription Fetal Kidney kidney
14 chr6:80837000-80895200 Weak transcription Fetal Intestine Small intestine
15 chr6:80837400-80854200 Weak transcription Brain Substantia Nigra brain
16 chr6:80837600-80853000 Weak transcription Brain Hippocampus Middle brain
17 chr6:80838000-80846800 Strong transcription Liver Liver
18 chr6:80838400-80852800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr6:80838400-80853400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:80838600-80852800 Weak transcription Aorta Aorta
21 chr6:80838600-80857400 Weak transcription Primary hematopoietic stem cells blood
22 chr6:80838600-80873200 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr6:80838800-80846400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr6:80838800-80852000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:80838800-80852000 Weak transcription Muscle Satellite Cultured Cells --
26 chr6:80838800-80852000 Weak transcription NHDF-Ad bronchial
27 chr6:80838800-80852200 Weak transcription NH-A brain
28 chr6:80838800-80852400 Weak transcription HSMMtube muscle
29 chr6:80838800-80852600 Weak transcription NHLF lung
30 chr6:80838800-80853200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr6:80839200-80873200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr6:80839200-80889600 Weak transcription Lung lung
33 chr6:80839600-80852800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr6:80839600-80857600 Weak transcription Fetal Muscle Trunk muscle
35 chr6:80839600-80859600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr6:80840000-80845800 Weak transcription Brain Angular Gyrus brain
37 chr6:80840000-80852000 Weak transcription Fetal Lung lung
38 chr6:80840000-80860800 Weak transcription Fetal Intestine Large intestine
39 chr6:80840200-80855000 Weak transcription Primary T helper cells fromperipheralblood blood
40 chr6:80841000-80847400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr6:80841000-80852400 Weak transcription Stomach Smooth Muscle stomach
42 chr6:80841000-80852800 Weak transcription Colonic Mucosa Colon
43 chr6:80841000-80859200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
44 chr6:80841000-80860800 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr6:80841200-80852000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr6:80841200-80852000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr6:80841200-80852800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr6:80841200-80852800 Weak transcription HMEC breast
49 chr6:80841200-80853200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr6:80841200-80854600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015