Variant report

Variant	rs28613486
Chromosome Location	chr12:123867268-123867269
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:25)
CpG islands
(count:0)
Chromatin interactive
region (count:11)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:25 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAFK	chr12:123867194-123867313	K562	blood:	n/a	n/a
2	POLR2A	chr12:123867028-123867564	K562	blood:	n/a	n/a
3	CUX1	chr12:123867102-123867366	K562	blood:	n/a	n/a
4	ZMIZ1	chr12:123867233-123867454	K562	blood:	n/a	n/a
5	MAZ	chr12:123867239-123867329	K562	blood:	n/a	n/a
6	ESRRA	chr12:123867206-123867554	HepG2	liver:	n/a	n/a
7	MAX	chr12:123867246-123867544	K562	blood:	n/a	n/a
8	RCOR1	chr12:123867247-123867523	K562	blood:	n/a	n/a
9	POLR2A	chr12:123867232-123867511	HCT-116	colon:	n/a	n/a
10	RCOR1	chr12:123867201-123867578	K562	blood:	n/a	n/a
11	POLR2A	chr12:123867089-123867526	K562	blood:	n/a	n/a
12	CBX3	chr12:123867074-123867622	K562	blood:	n/a	n/a
13	ZNF143	chr12:123867252-123867497	K562	blood:	n/a	n/a
14	TBL1XR1	chr12:123867060-123867327	K562	blood:	n/a	n/a
15	HEY1	chr12:123867056-123867608	K562	blood:	n/a	n/a
16	ZNF384	chr12:123867234-123867488	K562	blood:	n/a	n/a
17	POLR2A	chr12:123866838-123867490	K562	blood:	n/a	n/a
18	POLR2A	chr12:123867034-123867544	K562	blood:	n/a	n/a
19	BACH1	chr12:123867130-123867332	K562	blood:	n/a	n/a
20	MAZ	chr12:123867154-123867336	HepG2	liver:	n/a	n/a
21	POLR2A	chr12:123867117-123867593	HepG2	liver:	n/a	n/a
22	POLR2A	chr12:123867015-123867695	K562	blood:	n/a	n/a
23	HEY1	chr12:123867161-123867471	K562	blood:	n/a	n/a
24	RCOR1	chr12:123867264-123867497	HepG2	liver:	n/a	n/a
25	CBX3	chr12:123867174-123867543	K562	blood:	n/a	n/a

No data

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:123866701..123869300-chr12:124085669..124087764,2	K562	blood:
2	chr12:123845591..123852236-chr12:123866929..123875043,19	MCF-7	breast:
3	chr12:123866820..123869752-chr12:123919792..123923261,3	K562	blood:
4	chr12:123755389..123758333-chr12:123866833..123870129,4	K562	blood:
5	chr12:123845329..123854937-chr12:123865496..123876607,58	K562	blood:
6	chr12:123866977..123869044-chr12:124085781..124087608,2	MCF-7	breast:
7	chr12:123846880..123851536-chr12:123865445..123870876,12	MCF-7	breast:
8	chr12:123754759..123757395-chr12:123866766..123872450,7	MCF-7	breast:
9	chr12:123846590..123852305-chr12:123861449..123873718,39	K562	blood:
10	chr12:123855413..123857472-chr12:123866745..123868291,2	K562	blood:
11	chr12:123866599..123869577-chr12:123942434..123944403,3	MCF-7	breast:

No data

Variant related genes	Relation type
SETD8	TF binding region
ENSG00000184209	Chromatin interaction
ENSG00000256092	Chromatin interaction
ENSG00000139697	Chromatin interaction
ENSG00000111364	Chromatin interaction
ENSG00000150977	Chromatin interaction
ENSG00000111328	Chromatin interaction

Extended variants
information (count: 164 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:159)

rs_ID	r²[population]
rs10082867	0.81[ASN][1000 genomes]
rs10444439	0.82[JPT][hapmap]
rs10732573	0.94[JPT][hapmap]
rs10734902	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10744150	0.94[JPT][hapmap]
rs10744151	0.81[CHB][hapmap];1.00[JPT][hapmap]
rs10744152	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10744153	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10744154	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10772997	1.00[JPT][hapmap]
rs10773002	0.94[JPT][hapmap]
rs10773003	0.94[CHD][hapmap];0.84[JPT][hapmap]
rs10773005	0.94[CHD][hapmap];0.84[JPT][hapmap]
rs10773012	0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs10773013	0.88[ASN][1000 genomes]
rs10773018	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10846489	0.80[CHD][hapmap]
rs10846517	1.00[ASW][hapmap];0.95[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10846519	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10846520	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[ASN][1000 genomes]
rs10846523	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11057223	0.80[CHD][hapmap]
rs11057248	0.82[ASN][1000 genomes]
rs11057251	0.94[CHD][hapmap];0.84[JPT][hapmap]
rs11057254	0.81[ASN][1000 genomes]
rs11057261	0.81[ASN][1000 genomes]
rs11057273	0.81[ASN][1000 genomes]
rs11057276	0.94[CHD][hapmap];0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs11057283	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11057284	0.81[ASN][1000 genomes]
rs11057287	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1109559	0.80[CHD][hapmap]
rs11608305	0.84[JPT][hapmap]
rs11611141	0.81[ASN][1000 genomes]
rs11611694	0.81[ASN][1000 genomes]
rs11612234	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11613711	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12317103	0.81[ASN][1000 genomes]
rs12317452	0.84[JPT][hapmap]
rs12366872	0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs1568427	0.94[JPT][hapmap]
rs1609520	0.85[CHD][hapmap];0.94[JPT][hapmap]
rs1660	0.90[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs1727331	0.94[JPT][hapmap]
rs2048617	0.87[ASN][1000 genomes]
rs2280424	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs28410096	0.94[CHD][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs28414347	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28417583	0.82[AFR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28418709	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28419092	0.81[ASN][1000 genomes]
rs28435460	0.84[ASN][1000 genomes]
rs28446728	0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs28450974	0.83[ASN][1000 genomes]
rs28461471	0.83[ASN][1000 genomes]
rs28501453	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28503862	0.83[ASN][1000 genomes]
rs28509440	0.85[ASN][1000 genomes]
rs28517382	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28532037	0.94[CHD][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs28533432	0.94[CHD][hapmap];0.84[JPT][hapmap];0.83[ASN][1000 genomes]
rs28537583	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28546238	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28581850	0.83[ASN][1000 genomes]
rs28587386	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28592032	0.83[ASN][1000 genomes]
rs28594416	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28595660	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28602967	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28604484	0.83[ASN][1000 genomes]
rs28605269	0.90[ASN][1000 genomes]
rs28611282	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28627651	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28631903	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28660993	0.94[CHD][hapmap];0.84[JPT][hapmap]
rs28681105	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28703745	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28706693	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs28718696	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28733606	0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs28759130	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28786830	0.83[ASN][1000 genomes]
rs28820735	0.83[ASN][1000 genomes]
rs28825193	0.83[ASN][1000 genomes]
rs28862317	1.00[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs28865692	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28885203	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3088303	0.94[CHD][hapmap];0.84[JPT][hapmap]
rs3759111	1.00[ASW][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap]
rs3759114	1.00[ASW][hapmap];1.00[CEU][hapmap];0.85[CHD][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap]
rs3803001	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3825141	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4460848	0.84[JPT][hapmap]
rs4759374	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4759376	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4759377	0.94[CHD][hapmap];0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs4759407	1.00[ASW][hapmap];0.84[JPT][hapmap];1.00[MEX][hapmap];0.87[MKK][hapmap]
rs4759408	1.00[CEU][hapmap]
rs4759411	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs4759413	1.00[CEU][hapmap];0.88[JPT][hapmap]
rs4759414	1.00[CEU][hapmap];0.94[JPT][hapmap]
rs4759421	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56116847	0.80[ASN][1000 genomes]
rs57356592	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57416942	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs58491161	0.88[ASN][1000 genomes]
rs58537268	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs58948739	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59295450	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs60754073	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60755632	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs60835840	0.81[ASN][1000 genomes]
rs61058270	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61388686	0.81[ASN][1000 genomes]
rs61751327	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6416289	0.86[ASN][1000 genomes]
rs6488869	1.00[CEU][hapmap];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6488870	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6488871	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6488872	0.98[ASN][1000 genomes]
rs6488874	0.87[ASN][1000 genomes]
rs7137243	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7297649	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7297888	0.93[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7298909	0.81[ASN][1000 genomes]
rs7301163	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7304782	0.94[JPT][hapmap]
rs7310756	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7311304	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7312145	0.81[ASN][1000 genomes]
rs7315453	0.94[CHD][hapmap];0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs73216937	0.85[ASN][1000 genomes]
rs7484644	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7485967	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7486223	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7486723	0.90[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs7488340	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7952835	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7954704	0.81[ASN][1000 genomes]
rs7955367	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7959415	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7962723	0.84[ASN][1000 genomes]
rs7970080	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7971557	0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7972811	0.94[CHD][hapmap];0.84[JPT][hapmap];0.81[ASN][1000 genomes]
rs7973131	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7973878	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7977563	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9284166	1.00[CEU][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9300256	0.95[ASN][1000 genomes]
rs9300257	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9300259	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9669169	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9669273	0.81[ASN][1000 genomes]
rs9669295	0.80[ASN][1000 genomes]
rs9739008	0.95[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs9739171	0.81[ASN][1000 genomes]
rs9739565	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9795593	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1038841	chr12:123757305-124087671	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
2	nsv541622	chr12:123757305-124087671	Enhancers Strong transcription Genic enhancers Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
3	nsv1035223	chr12:123795559-123991706	Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
4	nsv899579	chr12:123843017-123901480	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
5	nsv826534	chr12:123859610-123876354	Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:123850600-123867800	Weak transcription	Right Atrium	heart
2	chr12:123864200-123867400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:123864400-123867800	Weak transcription	HMEC	breast
4	chr12:123864400-123867800	Weak transcription	NHEK	skin
5	chr12:123864600-123868000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr12:123867000-123867600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr12:123867000-123867600	Flanking Active TSS	K562	blood
8	chr12:123867000-123868000	Enhancers	GM12878-XiMat	blood
9	chr12:123867000-123869600	Active TSS	HSMM	muscle
10	chr12:123867200-123867400	Enhancers	H1 Cell Line	embryonic stem cell
11	chr12:123867200-123867400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr12:123867200-123867400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr12:123867200-123867400	Enhancers	Lung	lung
14	chr12:123867200-123867400	Enhancers	Psoas Muscle	Psoas
15	chr12:123867200-123867600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr12:123867200-123867600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr12:123867200-123867600	Enhancers	Fetal Muscle Trunk	muscle
18	chr12:123867200-123867600	Enhancers	Placenta	Placenta
19	chr12:123867200-123867600	Flanking Active TSS	Hela-S3	cervix
20	chr12:123867200-123867600	Flanking Active TSS	HepG2	liver
21	chr12:123867200-123867800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr12:123867200-123867800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr12:123867200-123867800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr12:123867200-123867800	Enhancers	Adipose Nuclei	Adipose
25	chr12:123867200-123867800	Enhancers	Liver	Liver
26	chr12:123867200-123867800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr12:123867200-123867800	Enhancers	Rectal Smooth Muscle	rectum
28	chr12:123867200-123867800	Enhancers	Dnd41	blood
29	chr12:123867200-123868600	Enhancers	Spleen	Spleen
30	chr12:123867200-123868800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr12:123867200-123868800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr12:123867200-123869000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr12:123867200-123869000	Active TSS	Colonic Mucosa	Colon
34	chr12:123867200-123869400	Active TSS	iPS-18 Cell Line	embryonic stem cell
35	chr12:123867200-123869400	Active TSS	A549	lung
36	chr12:123867200-123869600	Active TSS	H9 Cell Line	embryonic stem cell
37	chr12:123867200-123869600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr12:123867200-123869800	Active TSS	iPS-15b Cell Line	embryonic stem cell
39	chr12:123867200-123870000	Active TSS	HUES6 Cell Line	embryonic stem cell

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