Variant report

Variant rs2899431
Chromosome Location chr15:49525198-49525199
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49463600-49527800 Weak transcription HSMM muscle
2 chr15:49463600-49540200 Weak transcription Colonic Mucosa Colon
3 chr15:49487200-49531200 Weak transcription HMEC breast
4 chr15:49492000-49527800 Weak transcription Rectal Smooth Muscle rectum
5 chr15:49492000-49530200 Weak transcription Stomach Smooth Muscle stomach
6 chr15:49492000-49539400 Weak transcription Small Intestine intestine
7 chr15:49504200-49530800 Weak transcription Fetal Thymus thymus
8 chr15:49508800-49535800 Weak transcription A549 lung
9 chr15:49509400-49527400 Weak transcription Brain Cingulate Gyrus brain
10 chr15:49510000-49541800 Weak transcription NHEK skin
11 chr15:49510200-49537000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr15:49510800-49534400 Weak transcription Muscle Satellite Cultured Cells --
13 chr15:49511000-49527600 Weak transcription Dnd41 blood
14 chr15:49511200-49527400 Weak transcription Osteobl bone
15 chr15:49511400-49530600 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr15:49511800-49531400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr15:49511800-49532200 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr15:49513200-49527200 Weak transcription NHDF-Ad bronchial
19 chr15:49516000-49527400 Weak transcription Brain Hippocampus Middle brain
20 chr15:49516000-49531400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr15:49516200-49527600 Weak transcription Colon Smooth Muscle Colon
22 chr15:49518000-49535400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr15:49518000-49541000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr15:49518200-49548600 Weak transcription Aorta Aorta
25 chr15:49518400-49527600 Weak transcription NHLF lung
26 chr15:49518600-49527400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr15:49518600-49532000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr15:49518600-49557600 Weak transcription Esophagus oesophagus
29 chr15:49518800-49539200 Weak transcription Ovary ovary
30 chr15:49519400-49525400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr15:49520000-49525800 Weak transcription K562 blood
32 chr15:49520400-49527600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr15:49520400-49527600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr15:49520400-49527600 Weak transcription Brain Anterior Caudate brain
35 chr15:49520400-49527600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr15:49520400-49595600 Weak transcription Right Ventricle heart
37 chr15:49520600-49527600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr15:49520600-49531200 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr15:49520800-49526200 Strong transcription Primary T cells from cord blood blood
40 chr15:49520800-49531400 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr15:49521000-49525200 ZNF genes & repeats Fetal Intestine Large intestine
42 chr15:49521000-49525400 ZNF genes & repeats Fetal Intestine Small intestine
43 chr15:49521200-49527400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
44 chr15:49521400-49526000 ZNF genes & repeats GM12878-XiMat blood
45 chr15:49521800-49527800 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr15:49522000-49527600 Weak transcription Hela-S3 cervix
47 chr15:49522000-49534600 Weak transcription Fetal Muscle Trunk muscle
48 chr15:49522000-49537800 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr15:49522000-49538200 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr15:49522000-49540400 Weak transcription Stomach Mucosa stomach

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