Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:54018088..54021349-chr5:54022983..54028263,5	K562	blood:
2	chr5:54017504..54021673-chr5:54022029..54028384,8	K562	blood:
3	chr5:54024735..54028634-chr5:54029831..54032905,3	K562	blood:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12523476	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12659365	0.89[EUR][1000 genomes]
rs13164810	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1542165	0.89[EUR][1000 genomes]
rs1823055	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1867684	0.86[EUR][1000 genomes]
rs4242042	0.95[ASN][1000 genomes]
rs4286627	0.88[ASN][1000 genomes]
rs4302535	0.89[EUR][1000 genomes]
rs4429808	0.89[EUR][1000 genomes]
rs4485879	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4498221	0.97[ASN][1000 genomes]
rs4562000	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4588542	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4624748	0.97[ASN][1000 genomes]
rs4627947	0.89[EUR][1000 genomes]
rs4865582	0.89[EUR][1000 genomes]
rs4865583	0.89[EUR][1000 genomes]
rs4865584	0.89[EUR][1000 genomes]
rs4865864	0.89[EUR][1000 genomes]
rs4865866	0.89[EUR][1000 genomes]
rs4865867	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56046642	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6450239	0.88[EUR][1000 genomes]
rs6450243	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6872140	0.82[AFR][1000 genomes]
rs6876610	0.89[EUR][1000 genomes]
rs6877012	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6893796	0.91[ASN][1000 genomes]
rs6894873	0.89[EUR][1000 genomes]
rs7706028	0.89[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:54017000-54038000	Weak transcription	Aorta	Aorta

Quick Search: