Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:53965327..53967848-chr5:54025605..54028279,2	MCF-7	breast:
2	chr5:54018088..54021349-chr5:54022983..54028263,5	K562	blood:
3	chr5:54017504..54021673-chr5:54022029..54028384,8	K562	blood:
4	chr5:54024735..54028634-chr5:54029831..54032905,3	K562	blood:

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs12516090	0.86[AMR][1000 genomes]
rs12516335	0.86[AMR][1000 genomes]
rs12516850	0.86[AMR][1000 genomes]
rs12659365	0.92[EUR][1000 genomes]
rs13164810	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1542165	0.92[EUR][1000 genomes]
rs1823055	0.84[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs1867684	0.89[EUR][1000 genomes]
rs2121132	0.86[AMR][1000 genomes]
rs35429219	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs4302535	0.92[EUR][1000 genomes]
rs4348178	0.86[AMR][1000 genomes]
rs4353983	0.86[AMR][1000 genomes]
rs4353984	0.86[AMR][1000 genomes]
rs4359998	0.86[AMR][1000 genomes]
rs4429808	0.92[EUR][1000 genomes]
rs4485879	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4562000	0.82[EUR][1000 genomes]
rs4588542	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4604146	0.86[AMR][1000 genomes]
rs4627947	0.92[EUR][1000 genomes]
rs4865582	0.92[EUR][1000 genomes]
rs4865583	0.92[EUR][1000 genomes]
rs4865584	0.92[EUR][1000 genomes]
rs4865864	0.92[EUR][1000 genomes]
rs4865866	0.92[EUR][1000 genomes]
rs4865867	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs56046642	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6450239	0.91[EUR][1000 genomes]
rs6450243	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6876610	0.92[EUR][1000 genomes]
rs6877012	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6894873	0.92[EUR][1000 genomes]
rs7706028	0.92[EUR][1000 genomes]
rs977207	0.86[AMR][1000 genomes]
rs977208	0.86[AMR][1000 genomes]
rs977209	0.86[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880717	chr5:54025701-54106378	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:54017000-54038000	Weak transcription	Aorta	Aorta
2	chr5:54026200-54031600	Weak transcription	Fetal Heart	heart

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