Variant report

Variant	rs35940728
Chromosome Location	chr5:114611201-114611202
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:114599500..114601272-chr5:114611165..114613598,2	K562	blood:

Variant related genes	Relation type
ENSG00000243304	Chromatin interaction

rs_ID	r²[population]
rs17132480	0.92[AFR][1000 genomes]
rs17137549	0.92[AFR][1000 genomes]
rs17137556	0.92[AFR][1000 genomes]
rs17137563	0.92[AFR][1000 genomes]
rs57979677	0.89[AFR][1000 genomes]
rs58955791	0.92[AFR][1000 genomes]
rs59891755	1.00[AFR][1000 genomes]
rs59955726	0.92[AFR][1000 genomes]
rs60460575	0.92[AFR][1000 genomes]
rs73253428	0.84[AFR][1000 genomes]
rs73253432	0.92[AFR][1000 genomes]
rs73253434	0.92[AFR][1000 genomes]
rs73253440	0.92[AFR][1000 genomes]
rs73253463	0.92[AFR][1000 genomes]
rs73253466	0.92[AFR][1000 genomes]
rs73255427	0.92[AFR][1000 genomes]
rs73255447	0.92[AFR][1000 genomes]
rs73255479	0.92[AFR][1000 genomes]
rs73255484	0.92[AFR][1000 genomes]
rs73255489	0.92[AFR][1000 genomes]
rs73255491	0.92[AFR][1000 genomes]
rs73255494	0.92[AFR][1000 genomes]
rs73255498	0.92[AFR][1000 genomes]
rs73257403	0.89[AFR][1000 genomes]
rs73257406	0.92[AFR][1000 genomes]
rs73257411	0.86[AFR][1000 genomes]
rs73257413	0.92[AFR][1000 genomes]
rs73257417	0.86[AFR][1000 genomes]
rs73257425	0.92[AFR][1000 genomes]
rs73257437	0.92[AFR][1000 genomes]
rs73257446	1.00[AFR][1000 genomes]
rs73257462	1.00[AFR][1000 genomes]
rs73257485	1.00[AFR][1000 genomes]
rs73257491	0.92[AFR][1000 genomes]
rs73257494	0.92[AFR][1000 genomes]
rs73259410	0.92[AFR][1000 genomes]
rs73259416	0.92[AFR][1000 genomes]
rs73259426	0.92[AFR][1000 genomes]
rs7703973	0.92[AFR][1000 genomes]
rs7711888	0.92[AFR][1000 genomes]
rs7724266	0.92[AFR][1000 genomes]
rs7725609	0.92[AFR][1000 genomes]
rs7726219	0.92[AFR][1000 genomes]

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:114598800-114612200	Weak transcription	Gastric	stomach
2	chr5:114598800-114613000	Weak transcription	Esophagus	oesophagus
3	chr5:114599000-114612200	Weak transcription	Right Ventricle	heart
4	chr5:114599000-114612800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr5:114599000-114612800	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr5:114599000-114612800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr5:114599000-114612800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
8	chr5:114599000-114612800	Weak transcription	Fetal Intestine Large	intestine
9	chr5:114599000-114612800	Weak transcription	Fetal Thymus	thymus
10	chr5:114599000-114614200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr5:114599000-114617000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr5:114599000-114617200	Weak transcription	Thymus	Thymus
13	chr5:114599000-114624000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr5:114599000-114626600	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr5:114599000-114630800	Weak transcription	Psoas Muscle	Psoas
16	chr5:114599000-114631200	Weak transcription	Primary hematopoietic stem cells	blood
17	chr5:114599000-114631200	Weak transcription	HSMM	muscle
18	chr5:114599000-114631400	Weak transcription	Left Ventricle	heart
19	chr5:114599200-114611800	Weak transcription	Fetal Kidney	kidney
20	chr5:114599200-114612000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
21	chr5:114599200-114612600	Weak transcription	NH-A	brain
22	chr5:114599200-114612800	Weak transcription	Primary T helper cells PMA-I stimulated	--
23	chr5:114599200-114615000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr5:114599200-114615000	Weak transcription	Fetal Brain Male	brain
25	chr5:114599200-114616400	Weak transcription	Fetal Heart	heart
26	chr5:114599200-114622000	Weak transcription	Colon Smooth Muscle	Colon
27	chr5:114599200-114631200	Weak transcription	Rectal Smooth Muscle	rectum
28	chr5:114599400-114612200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr5:114599400-114613400	Weak transcription	Hela-S3	cervix
30	chr5:114599400-114615600	Weak transcription	Brain Anterior Caudate	brain
31	chr5:114599400-114621800	Weak transcription	Brain Angular Gyrus	brain
32	chr5:114599600-114612200	Weak transcription	K562	blood
33	chr5:114599800-114612600	Weak transcription	HepG2	liver
34	chr5:114600000-114612600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr5:114601000-114612400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr5:114601200-114612400	Weak transcription	Fetal Intestine Small	intestine
37	chr5:114601200-114612400	Weak transcription	Fetal Stomach	stomach
38	chr5:114601200-114631200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
39	chr5:114601200-114631400	Weak transcription	Aorta	Aorta
40	chr5:114602400-114612800	Strong transcription	HUES64 Cell Line	embryonic stem cell
41	chr5:114602800-114612800	Strong transcription	HUES48 Cell Line	embryonic stem cell
42	chr5:114602800-114621800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr5:114604000-114612600	Weak transcription	HUVEC	blood vessel
44	chr5:114604000-114622400	Weak transcription	NHDF-Ad	bronchial
45	chr5:114604000-114630600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr5:114605000-114612800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
47	chr5:114605800-114612400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr5:114608200-114611400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr5:114608200-114613200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
50	chr5:114608800-114611600	Strong transcription	iPS-18 Cell Line	embryonic stem cell

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