The 2.0 version of rSNPBase

Variant report

Variant rs73255427
Chromosome Location chr5:114550095-114550096
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114523400-114576200 Weak transcription Psoas Muscle Psoas
2 chr5:114528000-114563000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:114529200-114562600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr5:114529800-114551000 Weak transcription Left Ventricle heart
5 chr5:114530200-114562600 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr5:114530200-114562600 Weak transcription Stomach Smooth Muscle stomach
7 chr5:114530600-114594400 Weak transcription Pancreas Pancrea
8 chr5:114530800-114565200 Weak transcription NHDF-Ad bronchial
9 chr5:114531000-114551200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:114531000-114558800 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr5:114533600-114551200 Weak transcription HSMM muscle
12 chr5:114535200-114551200 Weak transcription HSMMtube muscle
13 chr5:114536000-114556000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr5:114538200-114551800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr5:114538400-114567000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr5:114538400-114572000 Weak transcription Lung lung
17 chr5:114538600-114555200 Weak transcription Placenta Placenta
18 chr5:114538800-114550800 Weak transcription Fetal Stomach stomach
19 chr5:114539200-114580200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr5:114539800-114566000 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr5:114540800-114567600 Weak transcription Hela-S3 cervix
22 chr5:114541000-114562000 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr5:114541600-114551200 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr5:114541800-114573400 Weak transcription NHLF lung
25 chr5:114542000-114575800 Weak transcription Small Intestine intestine
26 chr5:114543600-114551200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:114543600-114551200 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr5:114543600-114558800 Weak transcription NH-A brain
29 chr5:114543600-114562400 Weak transcription HUVEC blood vessel
30 chr5:114543800-114562800 Weak transcription Colon Smooth Muscle Colon
31 chr5:114543800-114565400 Weak transcription Brain Hippocampus Middle brain
32 chr5:114543800-114577800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr5:114545000-114553400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr5:114545400-114550600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr5:114545400-114562400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr5:114545400-114563200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr5:114545600-114555400 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr5:114545800-114551200 Weak transcription Fetal Thymus thymus
39 chr5:114546000-114562600 Weak transcription GM12878-XiMat blood
40 chr5:114546000-114563000 Weak transcription HUES6 Cell Line embryonic stem cell
41 chr5:114546400-114550600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:114546600-114556600 Weak transcription HepG2 liver
43 chr5:114546600-114560800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr5:114546800-114553000 Strong transcription Primary monocytes fromperipheralblood blood
45 chr5:114546800-114575600 Weak transcription H1 Cell Line embryonic stem cell
46 chr5:114546800-114578000 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr5:114547200-114551200 Weak transcription Liver Liver
48 chr5:114547600-114552600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:114547600-114563800 Weak transcription Thymus Thymus
50 chr5:114547600-114577600 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015