The 2.0 version of rSNPBase

Variant report

Variant rs73257462
Chromosome Location chr5:114615469-114615470
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114599000-114617000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:114599000-114617200 Weak transcription Thymus Thymus
3 chr5:114599000-114624000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:114599000-114626600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr5:114599000-114630800 Weak transcription Psoas Muscle Psoas
6 chr5:114599000-114631200 Weak transcription Primary hematopoietic stem cells blood
7 chr5:114599000-114631200 Weak transcription HSMM muscle
8 chr5:114599000-114631400 Weak transcription Left Ventricle heart
9 chr5:114599200-114616400 Weak transcription Fetal Heart heart
10 chr5:114599200-114622000 Weak transcription Colon Smooth Muscle Colon
11 chr5:114599200-114631200 Weak transcription Rectal Smooth Muscle rectum
12 chr5:114599400-114615600 Weak transcription Brain Anterior Caudate brain
13 chr5:114599400-114621800 Weak transcription Brain Angular Gyrus brain
14 chr5:114601200-114631200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr5:114601200-114631400 Weak transcription Aorta Aorta
16 chr5:114602800-114621800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:114604000-114622400 Weak transcription NHDF-Ad bronchial
18 chr5:114604000-114630600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr5:114609800-114617600 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr5:114610000-114621400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr5:114610400-114621400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr5:114610800-114621800 Weak transcription Brain Hippocampus Middle brain
23 chr5:114611000-114617800 Weak transcription Brain Substantia Nigra brain
24 chr5:114611200-114617400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:114611200-114618400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr5:114611200-114618600 Weak transcription Brain Germinal Matrix brain
27 chr5:114611200-114619000 Weak transcription HSMMtube muscle
28 chr5:114611200-114621800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr5:114611200-114622000 Weak transcription Adipose Nuclei Adipose
30 chr5:114611200-114622000 Weak transcription Brain Inferior Temporal Lobe brain
31 chr5:114611200-114630400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:114611200-114630400 Weak transcription Duodenum Mucosa Duodenum
33 chr5:114611200-114630800 Weak transcription Stomach Smooth Muscle stomach
34 chr5:114611400-114618800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:114611400-114621200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr5:114611400-114624200 Weak transcription Monocytes-CD14+_RO01746 blood
37 chr5:114611400-114627600 Weak transcription Primary B cells from cord blood blood
38 chr5:114611400-114628600 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr5:114611600-114619800 Weak transcription Brain Cingulate Gyrus brain
40 chr5:114611600-114622200 Weak transcription H1 Cell Line embryonic stem cell
41 chr5:114611600-114623200 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr5:114612400-114621600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr5:114612400-114625000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr5:114612600-114619000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr5:114612800-114616600 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr5:114612800-114621200 Weak transcription Primary monocytes fromperipheralblood blood
47 chr5:114612800-114622400 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr5:114612800-114630200 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr5:114615000-114615800 Enhancers Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015