The 2.0 version of rSNPBase

Variant report

Variant rs73255484
Chromosome Location chr5:114579787-114579788
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114530600-114594400 Weak transcription Pancreas Pancrea
2 chr5:114539200-114580200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr5:114547800-114596600 Weak transcription Brain Germinal Matrix brain
4 chr5:114548400-114596800 Weak transcription K562 blood
5 chr5:114549400-114597200 Weak transcription Aorta Aorta
6 chr5:114552200-114581800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr5:114555800-114579800 Strong transcription Primary monocytes fromperipheralblood blood
8 chr5:114559000-114587600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr5:114563400-114591600 Weak transcription Brain Anterior Caudate brain
10 chr5:114563400-114597600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr5:114565200-114597400 Weak transcription Colonic Mucosa Colon
12 chr5:114567400-114590600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr5:114567800-114589800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr5:114570200-114579800 Strong transcription Primary B cells from cord blood blood
15 chr5:114573400-114586000 Weak transcription A549 lung
16 chr5:114573800-114586000 Weak transcription Brain Angular Gyrus brain
17 chr5:114575000-114597000 Weak transcription Fetal Stomach stomach
18 chr5:114575800-114597000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr5:114576000-114596800 Weak transcription Fetal Kidney kidney
20 chr5:114576000-114596800 Weak transcription Rectal Smooth Muscle rectum
21 chr5:114576200-114579800 Enhancers HepG2 liver
22 chr5:114576200-114591000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr5:114576200-114596000 Weak transcription Hela-S3 cervix
24 chr5:114576200-114596800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr5:114576400-114584000 Weak transcription Primary hematopoietic stem cells blood
26 chr5:114576400-114590600 Weak transcription Ovary ovary
27 chr5:114576400-114594400 Weak transcription Lung lung
28 chr5:114576600-114582400 Weak transcription Brain Hippocampus Middle brain
29 chr5:114576600-114585000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr5:114576600-114586400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr5:114576600-114590800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr5:114576600-114593000 Weak transcription HSMMtube muscle
33 chr5:114576600-114596200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:114576600-114596400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr5:114576600-114597000 Weak transcription Brain Substantia Nigra brain
36 chr5:114576800-114585000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr5:114576800-114585000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr5:114576800-114591600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr5:114576800-114596000 Weak transcription NHDF-Ad bronchial
40 chr5:114576800-114596400 Weak transcription Fetal Lung lung
41 chr5:114576800-114597000 Weak transcription Thymus Thymus
42 chr5:114576800-114597400 Weak transcription Fetal Muscle Trunk muscle
43 chr5:114577000-114584200 Weak transcription Fetal Muscle Leg muscle
44 chr5:114577000-114590800 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr5:114577000-114591600 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr5:114577000-114591800 Weak transcription Psoas Muscle Psoas
47 chr5:114577000-114596800 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr5:114577000-114596800 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr5:114577000-114597200 Weak transcription Placenta Placenta
50 chr5:114577200-114595400 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015