The 2.0 version of rSNPBase

Variant report

Variant rs7725609
Chromosome Location chr5:114575371-114575372
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114523400-114576200 Weak transcription Psoas Muscle Psoas
2 chr5:114530600-114594400 Weak transcription Pancreas Pancrea
3 chr5:114539200-114580200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr5:114542000-114575800 Weak transcription Small Intestine intestine
5 chr5:114543800-114577800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:114546800-114575600 Weak transcription H1 Cell Line embryonic stem cell
7 chr5:114546800-114578000 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr5:114547600-114577600 Weak transcription Placenta Amnion Placenta Amnion
9 chr5:114547800-114578400 Weak transcription Esophagus oesophagus
10 chr5:114547800-114596600 Weak transcription Brain Germinal Matrix brain
11 chr5:114548400-114596800 Weak transcription K562 blood
12 chr5:114548800-114575400 Weak transcription Brain Substantia Nigra brain
13 chr5:114549400-114597200 Weak transcription Aorta Aorta
14 chr5:114550200-114575400 Weak transcription Rectal Smooth Muscle rectum
15 chr5:114552200-114581800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr5:114555800-114579800 Strong transcription Primary monocytes fromperipheralblood blood
17 chr5:114556200-114578000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr5:114556400-114575600 Weak transcription Fetal Brain Male brain
19 chr5:114557000-114577400 Weak transcription Fetal Heart heart
20 chr5:114557800-114579400 Weak transcription Gastric stomach
21 chr5:114558000-114579400 Weak transcription Brain Cingulate Gyrus brain
22 chr5:114559000-114587600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr5:114559400-114578200 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr5:114559400-114579400 Weak transcription Spleen Spleen
25 chr5:114560600-114577400 Strong transcription Primary B cells from peripheral blood blood
26 chr5:114562400-114577600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr5:114562400-114577600 Strong transcription Primary neutrophils fromperipheralblood blood
28 chr5:114563200-114578400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr5:114563400-114575400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr5:114563400-114578600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr5:114563400-114591600 Weak transcription Brain Anterior Caudate brain
32 chr5:114563400-114597600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr5:114565000-114575600 Weak transcription HSMMtube muscle
34 chr5:114565200-114597400 Weak transcription Colonic Mucosa Colon
35 chr5:114565800-114575400 Weak transcription Fetal Brain Female brain
36 chr5:114566000-114576200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr5:114566600-114575400 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr5:114566800-114575400 Weak transcription NH-A brain
39 chr5:114567400-114590600 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr5:114567600-114575400 Weak transcription Muscle Satellite Cultured Cells --
41 chr5:114567800-114589800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr5:114568200-114575400 Weak transcription Osteobl bone
43 chr5:114568800-114577600 Weak transcription NHEK skin
44 chr5:114569600-114577600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr5:114569600-114578000 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr5:114569600-114578200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr5:114569800-114577200 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr5:114570000-114577000 Strong transcription Rectal Mucosa Donor 31 rectum
49 chr5:114570000-114577400 Strong transcription Primary T cells fromperipheralblood blood
50 chr5:114570000-114577600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015