Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10447974	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs11787263	0.91[JPT][hapmap]
rs12678304	0.88[CEU][hapmap];0.95[JPT][hapmap]
rs13260144	0.83[YRI][hapmap]
rs13265557	0.82[YRI][hapmap]
rs13275765	0.94[CEU][hapmap];0.95[JPT][hapmap]
rs1348143	0.91[JPT][hapmap]
rs1441237	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs1458118	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs16916239	0.82[CEU][hapmap];0.86[JPT][hapmap];0.80[AMR][1000 genomes]
rs16916375	0.82[YRI][hapmap]
rs35552599	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3758063	0.94[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap]
rs3779794	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3779797	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4960988	0.83[ASN][1000 genomes]
rs4961208	0.95[CHB][hapmap];0.95[JPT][hapmap]
rs4961212	0.91[JPT][hapmap]
rs6991672	0.82[YRI][hapmap]
rs6998936	0.83[YRI][hapmap]
rs978132	0.95[CHB][hapmap];0.95[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023510	chr8:87429001-87874948	Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
2	nsv971682	chr8:87669499-87671270	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:87669400-87672000	Enhancers	Pancreas	Pancrea

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