Variant report

Variant	rs3809471
Chromosome Location	chr15:44719622-44719623
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SMARCB1	chr15:44718650-44720312	Hela-S3	cervix:	n/a	n/a
2	POLR2A	chr15:44718840-44720435	GM12892	blood:	n/a	n/a
3	POLR2A	chr15:44718981-44720289	GM19099	blood:	n/a	n/a
4	POLR2A	chr15:44719013-44720195	A549	lung:	n/a	n/a
5	EGR1	chr15:44719574-44719936	K562	blood:	n/a	chr15:44719778-44719787
6	MYC	chr15:44718805-44720687	K562	blood:	n/a	n/a
7	SP1	chr15:44718921-44720018	A549	lung:	n/a	chr15:44719450-44719461 chr15:44719364-44719373 chr15:44719362-44719374 chr15:44719451-44719460 chr15:44719451-44719465 chr15:44719363-44719372 chr15:44719755-44719769 chr15:44719362-44719374
8	GATA2	chr15:44718967-44720344	SH-SY5Y	brain:	n/a	n/a
9	TAF1	chr15:44719126-44720062	GM12891	blood:	n/a	n/a
10	MAFK	chr15:44718850-44720296	K562	blood:	n/a	n/a
11	POLR2A	chr15:44718918-44720192	HepG2	liver:	n/a	n/a
12	POLR2A	chr15:44718713-44720482	GM12878	blood:	n/a	n/a
13	SMC3	chr15:44718987-44719675	HepG2	liver:	n/a	n/a
14	YY1	chr15:44719264-44720197	GM12891	blood:	n/a	n/a
15	ZBTB33	chr15:44719416-44719933	A549	lung:	n/a	n/a
16	EP300	chr15:44719153-44719842	GM12878	blood:	n/a	chr15:44719764-44719773 chr15:44719782-44719798
17	TEAD4	chr15:44719034-44720366	ECC-1	luminal epithelium:	n/a	n/a
18	CTCF	chr15:44719041-44719810	GM12878	blood:	n/a	chr15:44719333-44719351
19	ELK4	chr15:44719108-44719964	Hela-S3	cervix:	n/a	n/a
20	E2F4	chr15:44719016-44720349	Hela-S3	cervix:	n/a	chr15:44719196-44719213 chr15:44719895-44719902 chr15:44719842-44719849 chr15:44719895-44719902 chr15:44720179-44720191 chr15:44719377-44719391 chr15:44720106-44720117 chr15:44719841-44719849 chr15:44719842-44719849 chr15:44719895-44719902 chr15:44719199-44719206 chr15:44719364-44719373 chr15:44719842-44719849 chr15:44719778-44719787 chr15:44720106-44720113 chr15:44719199-44719210 chr15:44719260-44719271 chr15:44719261-44719271 chr15:44719841-44719850 chr15:44719838-44719850
21	TAF1	chr15:44718892-44720292	ECC-1	luminal epithelium:	n/a	n/a
22	POLR2A	chr15:44718973-44720319	GM18505	blood:	n/a	n/a
23	CEBPB	chr15:44719155-44720336	HepG2	liver:	n/a	n/a
24	NFIC	chr15:44719155-44719806	GM12878	blood:	n/a	n/a
25	POLR2A	chr15:44718965-44720278	Gliobla	brain:	n/a	n/a
26	ZNF143	chr15:44718972-44720124	H1-hESC	embryonic stem cell:	n/a	chr15:44719248-44719266
27	TEAD4	chr15:44719167-44720007	SK-N-SH	brain:	n/a	n/a
28	POLR2A	chr15:44718802-44720410	Hela-S3	cervix:	n/a	n/a
29	MTA3	chr15:44718741-44720467	GM12878	blood:	n/a	n/a
30	POLR2A	chr15:44718911-44720063	HCT-116	colon:	n/a	n/a
31	POLR2A	chr15:44718958-44720213	HepG2	liver:	n/a	n/a
32	SP1	chr15:44719019-44719956	GM12878	blood:	n/a	chr15:44719450-44719461 chr15:44719364-44719373 chr15:44719362-44719374 chr15:44719451-44719460 chr15:44719451-44719465 chr15:44719363-44719372 chr15:44719755-44719769 chr15:44719362-44719374
33	YY1	chr15:44719537-44720235	ECC-1	luminal epithelium:	n/a	n/a
34	YY1	chr15:44719215-44720302	GM12878	blood:	n/a	n/a
35	NRF1	chr15:44719103-44719976	Hela-S3	cervix:	n/a	chr15:44719777-44719788 chr15:44719774-44719788 chr15:44719779-44719788 chr15:44719777-44719788 chr15:44719777-44719791
36	CEBPB	chr15:44719186-44720080	IMR90	lung:	n/a	n/a
37	NFATC1	chr15:44718991-44720011	GM12878	blood:	n/a	n/a
38	BRCA1	chr15:44718912-44721421	Hela-S3	cervix:	n/a	chr15:44719873-44719880
39	ELF1	chr15:44719388-44719862	A549	lung:	n/a	chr15:44719762-44719773
40	RELA	chr15:44719061-44720310	GM19193	blood:	n/a	n/a
41	POLR2A	chr15:44718995-44720164	HUVEC	blood vessel:	n/a	n/a
42	SRF	chr15:44718917-44719653	MCF-7	breast:	n/a	n/a
43	HEY1	chr15:44718919-44720124	K562	blood:	n/a	n/a
44	CHD1	chr15:44719422-44721487	H1-hESC	embryonic stem cell:	n/a	n/a
45	POLR2A	chr15:44718906-44720217	K562	blood:	n/a	n/a
46	MXI1	chr15:44719083-44720048	H1-hESC	embryonic stem cell:	n/a	n/a
47	TAF1	chr15:44719579-44719986	SK-N-SH	brain:	n/a	n/a
48	ATF2	chr15:44719025-44720207	GM12878	blood:	n/a	n/a
49	MAX	chr15:44718883-44720422	A549	lung:	n/a	n/a
50	POU2F2	chr15:44719433-44719656	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:44718440..44720700-chr15:44829136..44830677,2	K562	blood:
2	chr15:44719522..44720101-chrX:12993258..12994089,2	Hela-S3	cervix:
3	chr10:92980435..92981251-chr15:44719397..44720060,2	Hela-S3	cervix:
4	chr15:44719096..44719799-chr16:69458630..69459143,2	Hela-S3	cervix:
5	chr15:44718905..44719745-chr15:91445892..91446538,2	Hela-S3	cervix:
6	chr15:44719413..44722163-chr15:44807893..44809754,2	K562	blood:
7	chr15:44588053..44590579-chr15:44719354..44720991,3	K562	blood:
8	chr15:44719279..44719851-chr16:29802138..29802810,2	Hela-S3	cervix:
9	chr15:44718811..44719781-chr17:62501482..62502406,2	Hela-S3	cervix:
10	chr15:44719181..44719868-chr9:95526680..95527658,2	Hela-S3	cervix:
11	chr15:44579706..44582433-chr15:44718054..44720169,2	MCF-7	breast:
12	chr15:44586214..44590579-chr15:44718275..44720991,4	K562	blood:
13	chr15:44580352..44582378-chr15:44719445..44721367,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000259595	TF binding region
CTDSPL2	TF binding region
ENSG00000079616	Chromatin interaction
ENSG00000180628	Chromatin interaction
ENSG00000196547	Chromatin interaction
ENSG00000205542	Chromatin interaction
ENSG00000108654	Chromatin interaction
ENSG00000104131	Chromatin interaction
ENSG00000103018	Chromatin interaction
ENSG00000259563	Chromatin interaction
ENSG00000166734	Chromatin interaction
ENSG00000185963	Chromatin interaction
ENSG00000203575	Chromatin interaction

Extended variants
information (count: 106 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:97)

rs_ID	r²[population]
rs10152710	0.94[EUR][1000 genomes]
rs10162700	0.80[CHB][hapmap];0.92[JPT][hapmap]
rs1021800	0.88[GIH][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs10467977	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12324710	0.82[JPT][hapmap]
rs12591178	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12591581	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs12591811	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12592995	1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs12593125	1.00[EUR][1000 genomes]
rs12593325	0.94[EUR][1000 genomes]
rs12593686	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12593943	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12594110	1.00[CEU][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs12594139	0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12594167	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12594621	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12594645	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12594746	1.00[EUR][1000 genomes]
rs12594905	0.81[ASW][hapmap];0.92[JPT][hapmap];0.92[LWK][hapmap];0.81[MKK][hapmap];0.85[YRI][hapmap]
rs12595484	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12595838	0.80[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.92[JPT][hapmap]
rs17551416	0.94[EUR][1000 genomes]
rs2055061	1.00[EUR][1000 genomes]
rs2277610	1.00[GIH][hapmap]
rs2288341	1.00[GIH][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs2288342	1.00[EUR][1000 genomes]
rs2303577	1.00[GIH][hapmap];1.00[TSI][hapmap];0.94[EUR][1000 genomes]
rs2303578	0.88[GIH][hapmap];0.87[EUR][1000 genomes]
rs2412883	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2412909	1.00[EUR][1000 genomes]
rs2433350	0.87[ASW][hapmap];0.80[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];1.00[EUR][1000 genomes]
rs2555353	1.00[ASW][hapmap];0.92[JPT][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];0.90[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2556562	0.83[AFR][1000 genomes]
rs2556566	0.93[ASW][hapmap];1.00[JPT][hapmap];0.90[LWK][hapmap];0.90[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2556567	0.84[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs28508235	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28561508	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs2899113	0.94[EUR][1000 genomes]
rs35555389	1.00[EUR][1000 genomes]
rs35932349	1.00[GIH][hapmap]
rs3784565	1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs3784567	0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs3816928	1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs3986142	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs3986143	0.81[CHD][hapmap];0.92[JPT][hapmap];1.00[EUR][1000 genomes]
rs4146283	0.82[ASW][hapmap];0.93[LWK][hapmap];0.81[MKK][hapmap];0.95[YRI][hapmap]
rs4415978	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4477677	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4577056	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4924746	0.85[ASN][1000 genomes]
rs57270586	1.00[EUR][1000 genomes]
rs58956090	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs59230801	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59997416	0.94[EUR][1000 genomes]
rs60003667	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60399672	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61185650	1.00[EUR][1000 genomes]
rs61234123	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61258861	1.00[EUR][1000 genomes]
rs61278540	0.94[EUR][1000 genomes]
rs61329003	1.00[EUR][1000 genomes]
rs61501839	1.00[EUR][1000 genomes]
rs6493103	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs7162671	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[JPT][hapmap];0.95[YRI][hapmap];0.93[AFR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7162802	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7163529	0.82[AFR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7164709	0.87[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.90[MKK][hapmap];0.95[YRI][hapmap];0.82[AFR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7166278	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7166945	1.00[JPT][hapmap];0.85[YRI][hapmap];0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7167752	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7169333	1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs7170248	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7172106	0.87[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];1.00[EUR][1000 genomes]
rs7175200	0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7178318	1.00[JPT][hapmap];0.95[YRI][hapmap];1.00[EUR][1000 genomes]
rs7179390	0.92[JPT][hapmap];0.85[YRI][hapmap]
rs7179894	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7181772	1.00[ASW][hapmap];0.81[CHD][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7183109	0.93[AFR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8023453	1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs8024623	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8024805	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8025727	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8025876	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8025955	0.88[AFR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8026945	1.00[CEU][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs8027036	1.00[EUR][1000 genomes]
rs8028509	1.00[EUR][1000 genomes]
rs8028907	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs8032079	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8037395	1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs883943	0.81[CHD][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs9672237	0.87[ASW][hapmap];1.00[CEU][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.91[YRI][hapmap];0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9673085	1.00[JPT][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs9806511	0.90[JPT][hapmap]
rs9806725	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.88[MKK][hapmap];0.95[YRI][hapmap];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431387	chr15:43929378-44862930	Weak transcription Strong transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	158 gene(s)	inside rSNPs	diseases
2	nsv931051	chr15:43988761-44833518	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	154 gene(s)	inside rSNPs	diseases
3	esv3410956	chr15:44425145-44823647	Strong transcription Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	nsv904177	chr15:44582886-44821843	Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv569299	chr15:44598642-44776075	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
6	nsv904178	chr15:44609796-44724287	Active TSS Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
7	nsv569300	chr15:44609796-44763598	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv904179	chr15:44614684-44821843	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
9	esv3386433	chr15:44654644-45037538	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	135 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:44718000-44720600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr15:44718000-44721800	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr15:44718000-44722200	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr15:44718200-44720400	Active TSS	Brain Anterior Caudate	brain
5	chr15:44718200-44720400	Active TSS	Brain Substantia Nigra	brain
6	chr15:44718200-44720600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr15:44718200-44720600	Active TSS	Brain Inferior Temporal Lobe	brain
8	chr15:44718200-44720600	Active TSS	Duodenum Mucosa	Duodenum
9	chr15:44718200-44720600	Active TSS	Rectal Smooth Muscle	rectum
10	chr15:44718200-44720800	Active TSS	Brain Germinal Matrix	brain
11	chr15:44718200-44720800	Active TSS	Rectal Mucosa Donor 29	rectum
12	chr15:44718200-44721000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr15:44718200-44721000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr15:44718200-44721200	Active TSS	HUES64 Cell Line	embryonic stem cell
15	chr15:44718200-44721200	Active TSS	iPS-18 Cell Line	embryonic stem cell
16	chr15:44718200-44721200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr15:44718200-44721200	Active TSS	NHEK	skin
18	chr15:44718200-44721400	Active TSS	GM12878-XiMat	blood
19	chr15:44718200-44721600	Active TSS	H9 Cell Line	embryonic stem cell
20	chr15:44718200-44721600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr15:44718200-44721600	Active TSS	Fetal Intestine Small	intestine
22	chr15:44718200-44721600	Active TSS	Stomach Smooth Muscle	stomach
23	chr15:44718200-44721800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr15:44718200-44721800	Active TSS	HUES48 Cell Line	embryonic stem cell
25	chr15:44718200-44721800	Active TSS	HUES6 Cell Line	embryonic stem cell
26	chr15:44718200-44721800	Active TSS	iPS-20b Cell Line	embryonic stem cell
27	chr15:44718200-44722000	Active TSS	H1 Cell Line	embryonic stem cell
28	chr15:44718400-44719800	Active TSS	HepG2	liver
29	chr15:44718400-44720200	Active TSS	Primary T cells from cord blood	blood
30	chr15:44718400-44720200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr15:44718400-44720400	Active TSS	Brain Hippocampus Middle	brain
32	chr15:44718400-44720600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
33	chr15:44718400-44720600	Active TSS	Brain Cingulate Gyrus	brain
34	chr15:44718400-44720600	Active TSS	Colon Smooth Muscle	Colon
35	chr15:44718400-44720600	Active TSS	Duodenum Smooth Muscle	Duodenum
36	chr15:44718400-44720800	Active TSS	Primary T helper naive cells from peripheral blood	blood
37	chr15:44718400-44720800	Active TSS	Fetal Brain Female	brain
38	chr15:44718400-44720800	Active TSS	Left Ventricle	heart
39	chr15:44718400-44720800	Active TSS	Stomach Mucosa	stomach
40	chr15:44718400-44721000	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr15:44718400-44721000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr15:44718400-44721000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
43	chr15:44718400-44721000	Active TSS	Colonic Mucosa	Colon
44	chr15:44718400-44721000	Active TSS	Thymus	Thymus
45	chr15:44718400-44721000	Active TSS	Osteobl	bone
46	chr15:44718400-44721200	Active TSS	HSMM	muscle
47	chr15:44718400-44721400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
48	chr15:44718400-44721400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr15:44718400-44721400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
50	chr15:44718400-44721400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin

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