Variant report

Variant	rs3862776
Chromosome Location	chr11:83507360-83507361
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83505269..83508166-chr11:83508508..83510887,2	K562	blood:

Extended variants
information (count: 38 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10792693	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1113082	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11233755	0.87[EUR][1000 genomes]
rs12283621	0.84[EUR][1000 genomes]
rs12799838	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1400310	0.87[EUR][1000 genomes]
rs1451391	0.85[EUR][1000 genomes]
rs1451392	0.84[EUR][1000 genomes]
rs1451393	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1516617	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1516618	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1516622	0.86[EUR][1000 genomes]
rs1516624	0.85[EUR][1000 genomes]
rs1961555	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2040310	0.90[EUR][1000 genomes]
rs2040311	0.90[EUR][1000 genomes]
rs2040312	0.90[EUR][1000 genomes]
rs3851171	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3862775	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4117186	0.84[EUR][1000 genomes]
rs4362168	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4396309	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4480568	0.88[EUR][1000 genomes]
rs6592143	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6592144	0.91[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6592148	0.91[EUR][1000 genomes]
rs7107629	0.90[EUR][1000 genomes]
rs7122007	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7124506	0.84[EUR][1000 genomes]
rs7130803	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs715858	0.84[EUR][1000 genomes]
rs7483854	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7937553	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7937829	0.87[EUR][1000 genomes]
rs7941665	0.88[EUR][1000 genomes]
rs7946278	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7946494	0.89[EUR][1000 genomes]
rs7947211	0.85[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83506000-83507400	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr11:83506600-83508400	Enhancers	Brain Hippocampus Middle	brain
3	chr11:83506800-83507400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr11:83507000-83507400	Enhancers	Pancreatic Islets	Pancreatic Islet
5	chr11:83507000-83508200	Enhancers	Brain Substantia Nigra	brain
6	chr11:83507000-83508600	Enhancers	Brain Cingulate Gyrus	brain

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