Variant report

Variant	rs6592143
Chromosome Location	chr11:83509799-83509800
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83505269..83508166-chr11:83508508..83510887,2	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10792693	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1113082	0.95[CHB][hapmap];0.95[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11233755	0.89[CEU][hapmap];0.87[CHB][hapmap];0.83[JPT][hapmap];0.88[EUR][1000 genomes]
rs1155448	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs11820522	0.80[CEU][hapmap];0.85[ASN][1000 genomes]
rs12283621	0.84[EUR][1000 genomes]
rs12794931	0.85[ASN][1000 genomes]
rs12799838	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1400310	0.84[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1451391	0.85[EUR][1000 genomes]
rs1451392	0.83[CEU][hapmap];0.85[EUR][1000 genomes]
rs1451393	0.96[CEU][hapmap];0.87[CHB][hapmap];0.95[JPT][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1516617	0.92[CEU][hapmap];0.83[CHB][hapmap];0.91[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1516618	0.92[CEU][hapmap];0.87[CHB][hapmap];0.91[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1516622	0.84[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1516623	0.91[CHB][hapmap];0.91[JPT][hapmap];0.83[ASN][1000 genomes]
rs1516624	0.85[EUR][1000 genomes]
rs1961555	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2040310	0.89[CEU][hapmap];0.92[EUR][1000 genomes]
rs2040311	0.92[EUR][1000 genomes]
rs2040312	0.88[CEU][hapmap];0.92[EUR][1000 genomes]
rs3851171	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3862775	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3862776	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4117186	0.80[CEU][hapmap];0.86[EUR][1000 genomes]
rs4362168	0.96[CEU][hapmap];0.87[JPT][hapmap];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4396309	0.96[CEU][hapmap];0.91[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4480568	0.86[CEU][hapmap];0.89[EUR][1000 genomes]
rs6592144	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592145	0.83[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.87[YRI][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6592148	0.96[CEU][hapmap];0.91[JPT][hapmap];0.93[EUR][1000 genomes]
rs7107629	0.92[EUR][1000 genomes]
rs7122007	0.96[CEU][hapmap];0.86[CHB][hapmap];0.95[JPT][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7124506	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs7130803	0.89[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs715858	0.85[EUR][1000 genomes]
rs7483854	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7937553	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7937829	0.88[EUR][1000 genomes]
rs7941665	0.88[CEU][hapmap];0.87[CHB][hapmap];0.82[JPT][hapmap];0.89[EUR][1000 genomes]
rs7946278	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7946494	0.88[CEU][hapmap];0.92[EUR][1000 genomes]
rs7947211	0.87[EUR][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83507400-83511000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr11:83508200-83514400	Weak transcription	Brain Angular Gyrus	brain
3	chr11:83508200-83514400	Weak transcription	Brain Substantia Nigra	brain
4	chr11:83508400-83514200	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr11:83509600-83510800	Enhancers	Brain Hippocampus Middle	brain

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