Variant report

Variant	rs4334877
Chromosome Location	chr5:112874987-112874988
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:112873639..112875869-chr5:112878944..112880732,3	K562	blood:
2	chr5:112867415..112871234-chr5:112874702..112879170,5	K562	blood:
3	chr5:112849106..112850875-chr5:112872838..112875001,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000047188	Chromatin interaction

Extended variants
information (count: 173 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:168)

rs_ID	r²[population]
rs10036298	0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10036300	0.93[CHB][hapmap];0.91[JPT][hapmap];0.98[ASN][1000 genomes]
rs10038632	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10039853	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10040203	1.00[CHB][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10040430	0.92[ASN][1000 genomes]
rs10046057	0.93[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs10053582	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10061552	0.94[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10063008	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10071816	0.94[CEU][hapmap];0.93[CHB][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10072547	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10079603	0.87[CHB][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10079758	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10079895	0.94[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10079973	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10080096	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1017209	0.92[CHB][hapmap];0.91[JPT][hapmap];0.92[ASN][1000 genomes]
rs1035888	0.81[ASN][1000 genomes]
rs10477495	0.93[CHB][hapmap];0.91[JPT][hapmap];0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10477497	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10477498	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10477499	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10477500	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10478126	0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs10478127	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10478129	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10478132	1.00[CHB][hapmap];0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs1052896	1.00[CHB][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs11241210	0.93[ASN][1000 genomes]
rs11241211	0.95[ASN][1000 genomes]
rs11241212	0.95[ASN][1000 genomes]
rs11241214	0.94[CEU][hapmap];1.00[CHB][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11241215	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs11742968	0.82[ASN][1000 genomes]
rs11747924	0.93[CEU][hapmap]
rs11748794	0.88[CEU][hapmap]
rs11749931	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11956399	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12186798	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12514105	0.82[ASN][1000 genomes]
rs12516911	0.82[ASN][1000 genomes]
rs12519323	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs12523145	0.93[CHB][hapmap]
rs12652172	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12654189	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12660001	0.94[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13359625	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13359648	0.84[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13359652	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs13359703	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs13362066	0.93[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.96[ASN][1000 genomes]
rs1549628	0.81[ASN][1000 genomes]
rs17135753	0.88[CEU][hapmap]
rs17135754	0.88[CEU][hapmap]
rs17135766	0.82[ASN][1000 genomes]
rs17135776	0.82[ASN][1000 genomes]
rs1820059	0.95[ASN][1000 genomes]
rs1833678	0.88[CEU][hapmap]
rs1833680	0.98[ASN][1000 genomes]
rs1833681	1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap];0.95[ASN][1000 genomes]
rs1862315	0.95[ASN][1000 genomes]
rs1970798	0.95[ASN][1000 genomes]
rs2042222	0.87[CEU][hapmap]
rs2162842	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2288449	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2416319	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28558374	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28848005	0.93[ASN][1000 genomes]
rs2900072	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34514665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34864074	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35162738	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35526509	0.99[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3763138	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs3763140	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3815911	0.93[CEU][hapmap];0.85[CHB][hapmap];0.81[JPT][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3842917	1.00[JPT][hapmap]
rs3846722	0.88[CEU][hapmap]
rs3906538	0.94[ASN][1000 genomes]
rs3909887	0.95[ASN][1000 genomes]
rs3936061	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4122547	0.88[ASN][1000 genomes]
rs4132093	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4132094	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4588592	0.94[CEU][hapmap];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4705551	0.88[CEU][hapmap]
rs4705552	0.82[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs4705553	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4705555	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4705556	0.84[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4705557	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4705558	0.88[CEU][hapmap]
rs4705821	1.00[JPT][hapmap]
rs4705825	0.92[CHB][hapmap];0.91[JPT][hapmap];0.95[ASN][1000 genomes]
rs4705826	0.88[CEU][hapmap]
rs4705827	0.93[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4705828	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4705832	0.81[ASN][1000 genomes]
rs56206672	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs57134656	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs58044020	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58391392	0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs60265545	0.94[ASN][1000 genomes]
rs60871281	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60914066	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6594721	0.92[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs6594729	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs6594732	0.93[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6594733	0.93[CHB][hapmap];0.81[JPT][hapmap];0.83[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6594734	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6594735	0.93[CHB][hapmap];0.84[AMR][1000 genomes]
rs6594738	0.82[ASN][1000 genomes]
rs67020702	0.81[EUR][1000 genomes]
rs67723806	0.81[EUR][1000 genomes]
rs67915940	0.97[ASN][1000 genomes]
rs6864369	0.88[CEU][hapmap]
rs6865809	0.89[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6867502	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6876448	0.91[ASN][1000 genomes]
rs6877432	0.88[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6877466	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6877834	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6878001	0.88[CEU][hapmap]
rs6878355	0.96[ASN][1000 genomes]
rs6880447	0.90[ASN][1000 genomes]
rs6883383	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6883441	0.88[CEU][hapmap]
rs6883557	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6886199	0.86[CHB][hapmap];0.84[AMR][1000 genomes]
rs6886628	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6887816	0.93[CHB][hapmap];0.91[JPT][hapmap];0.93[ASN][1000 genomes]
rs6889501	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6889574	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6889783	0.95[ASN][1000 genomes]
rs6898425	0.80[CEU][hapmap];0.93[CHB][hapmap];0.91[JPT][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs72805422	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73242809	0.81[EUR][1000 genomes]
rs7349799	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7701913	0.95[ASN][1000 genomes]
rs7704170	0.81[ASN][1000 genomes]
rs7705562	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap]
rs7706215	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7706958	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7707443	0.87[CEU][hapmap]
rs7707895	0.80[ASN][1000 genomes]
rs7709110	0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs7711078	1.00[CHB][hapmap];0.90[JPT][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7711211	0.94[CEU][hapmap];0.93[CHB][hapmap];0.83[JPT][hapmap];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7711367	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7713038	1.00[CHB][hapmap];0.91[JPT][hapmap];0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7713451	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7713846	0.98[ASN][1000 genomes]
rs7715601	0.82[ASN][1000 genomes]
rs7717644	0.98[ASN][1000 genomes]
rs7722918	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7729306	1.00[CHB][hapmap];0.91[JPT][hapmap];0.81[ASN][1000 genomes]
rs7730532	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7730557	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7730801	1.00[JPT][hapmap]
rs7730949	1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs7732310	0.81[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7737023	0.94[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs919304	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs929774	0.93[CHB][hapmap];0.91[JPT][hapmap];0.81[YRI][hapmap];0.95[ASN][1000 genomes]
rs9326893	0.94[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs957777	0.88[CEU][hapmap]
rs9654519	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882720	chr5:112859994-112911165	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv882721	chr5:112859994-112963488	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv882722	chr5:112868878-112899573	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv882723	chr5:112868878-112911165	Strong transcription Enhancers Weak transcription Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv882724	chr5:112868878-112933202	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4334877	YTHDC2	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:123 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:112850400-112879000	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr5:112850400-112879200	Weak transcription	Gastric	stomach
3	chr5:112850400-112904000	Weak transcription	Psoas Muscle	Psoas
4	chr5:112850600-112879200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr5:112850600-112908400	Weak transcription	Colonic Mucosa	Colon
6	chr5:112851400-112879000	Weak transcription	Brain Cingulate Gyrus	brain
7	chr5:112851600-112893200	Weak transcription	Fetal Brain Male	brain
8	chr5:112851600-112902800	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr5:112852400-112878800	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr5:112852400-112882200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr5:112852400-112882200	Weak transcription	Fetal Heart	heart
12	chr5:112853200-112882400	Weak transcription	Brain Angular Gyrus	brain
13	chr5:112857000-112877600	Weak transcription	HepG2	liver
14	chr5:112858800-112876000	Weak transcription	Brain Anterior Caudate	brain
15	chr5:112858800-112882000	Weak transcription	Brain Substantia Nigra	brain
16	chr5:112858800-112882200	Weak transcription	Rectal Smooth Muscle	rectum
17	chr5:112860400-112879000	Weak transcription	Brain Hippocampus Middle	brain
18	chr5:112860400-112882200	Weak transcription	Colon Smooth Muscle	Colon
19	chr5:112862800-112891200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
20	chr5:112864200-112882200	Weak transcription	Stomach Mucosa	stomach
21	chr5:112866000-112878000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr5:112867000-112882000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
23	chr5:112867000-112888200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr5:112867000-112910000	Weak transcription	Right Ventricle	heart
25	chr5:112867200-112878800	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr5:112867200-112880600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr5:112867200-112882400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
28	chr5:112867200-112903400	Weak transcription	Pancreas	Pancrea
29	chr5:112867200-112904000	Weak transcription	Lung	lung
30	chr5:112867200-112904200	Weak transcription	Aorta	Aorta
31	chr5:112867200-112909800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr5:112867200-112909800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr5:112867200-112910000	Weak transcription	Esophagus	oesophagus
34	chr5:112867400-112875000	Weak transcription	Brain Germinal Matrix	brain
35	chr5:112867400-112878800	Weak transcription	Thymus	Thymus
36	chr5:112867400-112879000	Weak transcription	NHLF	lung
37	chr5:112867400-112879200	Weak transcription	Cortex derived primary cultured neurospheres	brain
38	chr5:112867400-112879200	Weak transcription	Sigmoid Colon	Sigmoid Colon
39	chr5:112867400-112882200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr5:112867400-112888000	Weak transcription	HSMMtube	muscle
41	chr5:112867400-112888800	Weak transcription	Ovary	ovary
42	chr5:112867400-112926000	Weak transcription	Small Intestine	intestine
43	chr5:112867400-112933000	Weak transcription	H9 Cell Line	embryonic stem cell
44	chr5:112867600-112882600	Weak transcription	Fetal Brain Female	brain
45	chr5:112867600-112891200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr5:112867800-112877200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr5:112868000-112878400	Weak transcription	NHEK	skin
48	chr5:112868000-112879600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr5:112868000-112893400	Strong transcription	Dnd41	blood
50	chr5:112868200-112877400	Strong transcription	Primary monocytes fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links