Variant report

Variant	rs7701913
Chromosome Location	chr5:112849297-112849298
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:579)
CpG islands
(count:61)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:579 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RCOR1	chr5:112849003-112849548	GM12878	blood:	n/a	n/a
2	MYC	chr5:112849113-112849679	K562	blood:	n/a	n/a
3	TAF1	chr5:112849178-112849683	MCF-7	breast:	n/a	n/a
4	CTCF	chr5:112849220-112849370	GM12875	blood:	n/a	n/a
5	HEY1	chr5:112849142-112849834	HepG2	liver:	n/a	chr5:112849371-112849380 chr5:112849333-112849348
6	CTCF	chr5:112849280-112849430	HCT-116	colon:	n/a	n/a
7	YY1	chr5:112849091-112849816	A549	lung:	n/a	chr5:112849278-112849287
8	CTCF	chr5:112849081-112849432	A549	lung:	n/a	n/a
9	MYC	chr5:112849069-112849708	A549	lung:	n/a	n/a
10	USF1	chr5:112849125-112849556	A549	lung:	n/a	chr5:112849331-112849347 chr5:112849332-112849348
11	POLR2A	chr5:112849115-112849712	GM12891	blood:	n/a	n/a
12	POLR2A	chr5:112849075-112850323	GM12878	blood:	n/a	n/a
13	SMARCB1	chr5:112849180-112850066	Hela-S3	cervix:	n/a	n/a
14	ZNF143	chr5:112849103-112849701	H1-hESC	embryonic stem cell:	n/a	n/a
15	POLR2A	chr5:112849106-112849988	GM18951	blood:	n/a	n/a
16	USF1	chr5:112849233-112849506	SK-N-SH_RA	brain:	n/a	chr5:112849331-112849347 chr5:112849332-112849348
17	STAT3	chr5:112849297-112849525	MCF10A-Er-Src	breast:	n/a	chr5:112849490-112849510
18	POLR2A	chr5:112849118-112850144	Hela-S3	cervix:	n/a	n/a
19	SIN3A	chr5:112849112-112850105	H1-hESC	embryonic stem cell:	n/a	chr5:112849359-112849372
20	YY1	chr5:112849198-112849723	HCT-116	colon:	n/a	chr5:112849278-112849287
21	MYC	chr5:112849290-112849464	K562	blood:	n/a	n/a
22	RFX5	chr5:112849048-112849469	K562	blood:	n/a	n/a
23	JUND	chr5:112849092-112849781	K562	blood:	n/a	chr5:112849372-112849381
24	KAP1	chr5:112848618-112849478	K562	blood:	n/a	n/a
25	PAX5	chr5:112849243-112850018	GM12892	blood:	n/a	chr5:112849339-112849348
26	MAX	chr5:112849094-112849731	K562	blood:	n/a	n/a
27	EP300	chr5:112849146-112849621	GM12878	blood:	n/a	chr5:112849337-112849346 chr5:112849557-112849573
28	TAF1	chr5:112849118-112850152	H1-neurons	neurons:	n/a	n/a
29	CTCF	chr5:112849200-112849350	HepG2	liver:	n/a	n/a
30	CTCF	chr5:112849220-112849370	HRE	kidney:	n/a	n/a
31	POLR2A	chr5:112849101-112850052	H1-hESC	embryonic stem cell:	n/a	n/a
32	YY1	chr5:112848995-112850000	SK-N-SH	brain:	n/a	chr5:112849278-112849287
33	RAD21	chr5:112849126-112849367	K562	blood:	n/a	n/a
34	MAX	chr5:112849026-112849847	ECC-1	luminal epithelium:	n/a	n/a
35	CTCF	chr5:112849220-112849370	HepG2	liver:	n/a	n/a
36	IRF1	chr5:112849192-112849657	K562	blood:	n/a	chr5:112849286-112849295 chr5:112849531-112849540
37	TAF1	chr5:112849092-112849654	PFSK-1	brain:	n/a	n/a
38	RAD21	chr5:112849001-112849823	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTCF	chr5:112849097-112849770	IMR90	lung:	n/a	n/a
40	POLR2A	chr5:112849121-112849746	K562	blood:	n/a	n/a
41	CTCF	chr5:112849260-112849410	GM06990	blood:	n/a	n/a
42	YY1	chr5:112849081-112849884	GM12878	blood:	n/a	chr5:112849278-112849287
43	RAD21	chr5:112849027-112849546	A549	lung:	n/a	n/a
44	POLR2A	chr5:112849147-112849678	HepG2	liver:	n/a	n/a
45	MAFK	chr5:112849135-112849585	IMR90	lung:	n/a	n/a
46	EBF1	chr5:112849135-112849629	GM12878	blood:	n/a	n/a
47	ZNF263	chr5:112848757-112849639	HEK293-T-REx	kidney:	n/a	chr5:112849243-112849264
48	STAT3	chr5:112849100-112849297	GM12878	blood:	n/a	n/a
49	UBTF	chr5:112849217-112850210	K562	blood:	n/a	n/a
50	CTCF	chr5:112849160-112849310	HRPEpiC	eye:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:112849285-112849335	PANC-1	pancreas:	n/a
2	chr5:112849285-112849335	T-47D	breast:	n/a
3	chr5:112849285-112849335	GM06990	blood:	n/a
4	chr5:112849285-112849335	HIPEpiC	eye:	n/a
5	chr5:112849285-112849335	NH-A	brain:	n/a
6	chr5:112849285-112849335	GM12892	blood:	n/a
7	chr5:112849285-112849335	GM12891	blood:	n/a
8	chr5:112849285-112849335	BJ	skin:	n/a
9	chr5:112849285-112849335	HCM	heart:	n/a
10	chr5:112849285-112849335	PFSK-1	brain:	n/a
11	chr5:112849285-112849335	A549	lung:	n/a
12	chr5:112849285-112849335	GM19239	blood:	n/a
13	chr5:112849285-112849335	SK-N-SH_RA	brain:	n/a
14	chr5:112849285-112849335	NHDF-neo	bronchial:	n/a
15	chr5:112849285-112849335	GM12878	blood:	n/a
16	chr5:112849285-112849335	MCF10A-Er-Src	breast:	n/a
17	chr5:112849285-112849335	IMR90	lung:	fetal
18	chr5:112849285-112849335	HAEpiC	amniotic membrane:	n/a
19	chr5:112849285-112849335	LNCaP	prostate:	n/a
20	chr5:112849285-112849335	HL-60	blood:	n/a
21	chr5:112849285-112849335	ECC-1	luminal epithelium:	n/a
22	chr5:112849285-112849335	HPAEpiC	pulmonary alveolar:	n/a
23	chr5:112849285-112849335	SK-N-MC	brain:	n/a
24	chr5:112849285-112849335	AoSMC	blood vessel:	n/a
25	chr5:112849285-112849335	HNPCEpiC	eye:	n/a
26	chr5:112849285-112849335	AG04450	lung:	fetal
27	chr5:112849285-112849335	SK-N-SH	brain:	n/a
28	chr5:112849285-112849335	SAEC	small airway:	n/a
29	chr5:112849285-112849335	K562	blood:	n/a
30	chr5:112849285-112849335	Hepatocyte	liver:	n/a
31	chr5:112849285-112849335	Hela-S3	cervix:	n/a
32	chr5:112849285-112849335	CMK	blood:	n/a
33	chr5:112849285-112849335	HRPEpiC	eye:	n/a
34	chr5:112849285-112849335	SKMC	muscle:	n/a
35	chr5:112849285-112849335	HCT-116	colon:	n/a
36	chr5:112849285-112849335	AG04449	skin:	fetal
37	chr5:112849285-112849335	HepG2	liver:	n/a
38	chr5:112849285-112849335	U87	brain:	n/a
39	chr5:112849285-112849335	NB4	blood:	n/a
40	chr5:112849285-112849335	BE2_C	brain:	n/a
41	chr5:112849285-112849335	HUVEC	blood vessel:	n/a
42	chr5:112849285-112849335	H1-hESC	embryonic stem cell:	embryo
43	chr5:112849285-112849335	HEEpiC	esophagus:	n/a
44	chr5:112849285-112849335	HMEC	breast:	n/a
45	chr5:112849285-112849335	HCPEpiC	choroid plexus:	n/a
46	chr5:112849285-112849335	ovcar-3	ovarian:	n/a
47	chr5:112849285-112849335	HRCEpiC	kidney:	n/a
48	chr5:112849285-112849335	ProgFib	skin:	n/a
49	chr5:112849285-112849335	AG09309	skin:	n/a
50	chr5:112849285-112849335	Caco-2	colon:	n/a

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:112538594..112540259-chr5:112848065..112850694,2	MCF-7	breast:
2	chr5:112849001..112849959-chr9:103114723..103115456,2	Hela-S3	cervix:
3	chr5:112849179..112849987-chrX:16887943..16888707,2	Hela-S3	cervix:
4	chr5:112823438..112825437-chr5:112848716..112850682,3	MCF-7	breast:
5	chr3:156876906..156878652-chr5:112849281..112850980,2	MCF-7	breast:

No data

Variant related genes	Relation type
YTHDC2	TF binding region
YTHDC2	CpG island
ENSG00000171444	Chromatin interaction
ENSG00000102054	Chromatin interaction
ENSG00000136891	Chromatin interaction
ENSG00000163660	Chromatin interaction

Extended variants
information (count: 170 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:169)

rs_ID	r²[population]
rs10036298	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10036300	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10038632	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs10039853	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10040203	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10040430	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10040516	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10042563	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10043066	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10046057	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10052077	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10053582	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10061552	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs10063008	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs10065616	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10071816	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10072547	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10076131	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10079603	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10079758	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10079895	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10079973	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10080096	0.92[ASN][1000 genomes]
rs1017209	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1035888	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10477495	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10477497	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10477498	0.92[ASN][1000 genomes]
rs10477499	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10477500	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10478126	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10478127	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs10478129	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10478132	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1052896	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1080858	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11241210	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11241211	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11241212	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11241214	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs11241215	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11742968	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11749931	0.92[ASN][1000 genomes]
rs11750449	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11750488	0.86[EUR][1000 genomes]
rs11956399	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12186798	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs12514105	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12516911	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12519315	0.81[AMR][1000 genomes]
rs12523145	0.86[AMR][1000 genomes]
rs12652172	0.92[ASN][1000 genomes]
rs12654189	0.92[ASN][1000 genomes]
rs12660001	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13359625	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13359648	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13359652	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13359703	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13362066	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1549628	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17135766	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17135776	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1820059	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1833680	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1833681	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1862315	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1970798	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2115216	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2162842	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2162847	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2288449	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2416319	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs28558374	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs28848005	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2900072	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34514665	0.95[ASN][1000 genomes]
rs34864074	0.95[ASN][1000 genomes]
rs35162738	0.95[ASN][1000 genomes]
rs35526509	0.91[ASN][1000 genomes]
rs3763138	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3763140	0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs3815911	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs3842917	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3906538	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3909887	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3936061	0.95[ASN][1000 genomes]
rs4122547	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4132093	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4132094	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4334877	0.95[ASN][1000 genomes]
rs4588592	0.80[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs4705552	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4705553	0.94[ASN][1000 genomes]
rs4705555	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4705556	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4705557	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4705823	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4705825	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4705827	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4705828	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4705832	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4705833	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56030143	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56206672	0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs57134656	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58044020	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs58391392	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60265545	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60871281	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs60914066	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6594718	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6594719	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6594720	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6594721	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6594729	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6594732	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6594733	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6594734	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6594738	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs67915940	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6865809	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6867502	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6876448	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6877432	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6877466	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6877834	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs6878282	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6878355	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6878900	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6880447	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6883383	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6883557	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs6886628	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs6887816	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6889501	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6889574	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6889783	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6898425	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72805422	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7349799	0.80[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs754573	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7704170	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7706215	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7706796	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7706958	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7707895	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7709110	0.84[ASN][1000 genomes]
rs7711078	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7711211	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7711367	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7713038	0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7713451	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7713846	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7715601	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7717644	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7722918	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs7723108	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7729306	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7730532	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7730557	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7730949	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7732310	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7737023	0.80[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs919304	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs929774	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9326893	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs9326897	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9654519	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9885245	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv599396	chr5:112408944-112853189	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7701913	YTHDC2	cis	multi-tissue	Pritchard
rs7701913	YTHDC2	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:112848600-112849400	Flanking Active TSS	Dnd41	blood
2	chr5:112848600-112850000	Active TSS	Rectal Mucosa Donor 29	rectum
3	chr5:112848600-112850200	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:112848600-112850200	Active TSS	Colon Smooth Muscle	Colon
5	chr5:112848600-112850600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr5:112848600-112850600	Active TSS	Duodenum Smooth Muscle	Duodenum
7	chr5:112848600-112850800	Active TSS	K562	blood
8	chr5:112848800-112849400	Active TSS	Primary T regulatory cells fromperipheralblood	blood
9	chr5:112848800-112849600	Active TSS	Right Atrium	heart
10	chr5:112848800-112850000	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr5:112848800-112850000	Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chr5:112848800-112850000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr5:112848800-112850000	Active TSS	Primary T cells from cord blood	blood
14	chr5:112848800-112850000	Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr5:112848800-112850000	Active TSS	Primary T helper cells fromperipheralblood	blood
16	chr5:112848800-112850000	Active TSS	Liver	Liver
17	chr5:112848800-112850000	Active TSS	Brain Germinal Matrix	brain
18	chr5:112848800-112850000	Active TSS	HUVEC	blood vessel
19	chr5:112848800-112850200	Active TSS	HUES48 Cell Line	embryonic stem cell
20	chr5:112848800-112850200	Active TSS	HUES64 Cell Line	embryonic stem cell
21	chr5:112848800-112850200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr5:112848800-112850200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr5:112848800-112850200	Active TSS	Brain Cingulate Gyrus	brain
24	chr5:112848800-112850200	Active TSS	Brain Hippocampus Middle	brain
25	chr5:112848800-112850200	Active TSS	Brain Substantia Nigra	brain
26	chr5:112848800-112850200	Active TSS	Duodenum Mucosa	Duodenum
27	chr5:112848800-112850200	Active TSS	Fetal Brain Male	brain
28	chr5:112848800-112850200	Active TSS	Fetal Kidney	kidney
29	chr5:112848800-112850200	Active TSS	Left Ventricle	heart
30	chr5:112848800-112850200	Active TSS	Rectal Smooth Muscle	rectum
31	chr5:112848800-112850200	Active TSS	Hela-S3	cervix
32	chr5:112848800-112850400	Active TSS	Aorta	Aorta
33	chr5:112848800-112850400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
34	chr5:112848800-112850400	Active TSS	Psoas Muscle	Psoas
35	chr5:112848800-112850600	Active TSS	ES-I3 Cell Line	embryonic stem cell
36	chr5:112848800-112850600	Active TSS	iPS-15b Cell Line	embryonic stem cell
37	chr5:112848800-112850600	Active TSS	iPS-20b Cell Line	embryonic stem cell
38	chr5:112848800-112850600	Active TSS	Brain Angular Gyrus	brain
39	chr5:112848800-112850600	Active TSS	Brain Inferior Temporal Lobe	brain
40	chr5:112848800-112850600	Active TSS	Right Ventricle	heart
41	chr5:112848800-112850600	Active TSS	Stomach Smooth Muscle	stomach
42	chr5:112848800-112851000	Active TSS	A549	lung
43	chr5:112848800-112851400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr5:112849000-112849400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr5:112849000-112849400	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
46	chr5:112849000-112849400	Active TSS	Colonic Mucosa	Colon
47	chr5:112849000-112849800	Active TSS	Primary B cells from cord blood	blood
48	chr5:112849000-112849800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr5:112849000-112849800	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr5:112849000-112850000	Active TSS	Primary monocytes fromperipheralblood	blood

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