Variant report

Variant	rs7723108
Chromosome Location	chr5:112937962-112937963
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 174 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:167)

rs_ID	r²[population]
rs10036298	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10036300	0.93[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap]
rs10038632	0.86[ASN][1000 genomes]
rs10039853	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs10040203	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10040430	0.88[EUR][1000 genomes]
rs10040516	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10042563	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10043066	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10046057	0.90[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10052077	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10053582	0.80[CEU][hapmap];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10061552	1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[YRI][hapmap];0.86[ASN][1000 genomes]
rs10063008	0.87[ASN][1000 genomes]
rs10065616	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10071816	0.93[CHB][hapmap];0.84[JPT][hapmap];0.91[MEX][hapmap];0.82[ASN][1000 genomes]
rs10072547	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10076131	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10079603	0.86[CHB][hapmap];0.91[JPT][hapmap];0.86[ASN][1000 genomes]
rs10079758	0.82[ASN][1000 genomes]
rs10079895	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs10079973	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs10080096	1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs1017209	0.90[CEU][hapmap];0.92[CHB][hapmap];0.90[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.85[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1035888	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10477495	0.89[CEU][hapmap];0.93[CHB][hapmap];0.84[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10477497	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs10477498	0.82[ASN][1000 genomes]
rs10477499	0.89[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10477500	0.90[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10478126	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10478127	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs10478129	0.90[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.95[YRI][hapmap];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10478132	0.90[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1052896	0.89[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1080858	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11241210	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11241211	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11241212	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11241214	1.00[CHB][hapmap];0.94[CHD][hapmap];0.92[JPT][hapmap];0.95[MEX][hapmap];0.86[ASN][1000 genomes]
rs11241215	0.83[CEU][hapmap];1.00[CHB][hapmap];0.90[JPT][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11742968	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11749931	1.00[CHB][hapmap];0.94[CHD][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap];0.82[ASN][1000 genomes]
rs11956399	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs12186798	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs12514105	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12516911	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12519315	0.87[AMR][1000 genomes]
rs12523145	0.93[CHB][hapmap];0.84[CHD][hapmap];0.84[MEX][hapmap]
rs12652172	0.82[ASN][1000 genomes]
rs12654189	0.82[ASN][1000 genomes]
rs12660001	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[YRI][hapmap];0.82[ASN][1000 genomes]
rs13359625	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13359648	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13359652	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13359703	0.86[ASN][1000 genomes]
rs13362066	0.90[CEU][hapmap];0.93[CHB][hapmap];0.91[JPT][hapmap];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1549628	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17135766	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17135776	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1820059	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1833680	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1833681	0.85[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1862315	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1970798	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2115216	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2162842	0.82[ASN][1000 genomes]
rs2162847	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2288449	0.83[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.95[MEX][hapmap];0.81[YRI][hapmap];0.88[ASN][1000 genomes]
rs2416319	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28558374	0.82[ASN][1000 genomes]
rs28848005	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2900072	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3763138	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];0.91[JPT][hapmap];0.90[LWK][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3763140	1.00[CHB][hapmap];0.91[JPT][hapmap];0.80[YRI][hapmap];0.87[ASN][1000 genomes]
rs3815911	0.85[CHB][hapmap];0.94[CHD][hapmap];0.91[JPT][hapmap];0.81[LWK][hapmap];0.81[YRI][hapmap];0.87[ASN][1000 genomes]
rs3842917	0.90[JPT][hapmap];0.81[EUR][1000 genomes]
rs3906371	0.84[JPT][hapmap]
rs3906538	0.86[EUR][1000 genomes]
rs3909887	0.86[EUR][1000 genomes]
rs3936061	1.00[CHB][hapmap];0.94[CHD][hapmap];0.91[JPT][hapmap];0.95[MEX][hapmap]
rs4122547	0.84[EUR][1000 genomes]
rs4132093	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4334877	1.00[CHB][hapmap];0.91[JPT][hapmap]
rs4588592	0.87[ASN][1000 genomes]
rs4705552	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4705553	0.80[ASN][1000 genomes]
rs4705555	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4705556	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4705557	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.88[ASN][1000 genomes]
rs4705821	0.91[JPT][hapmap];0.91[MEX][hapmap]
rs4705823	0.89[CEU][hapmap];0.83[EUR][1000 genomes]
rs4705825	0.90[CEU][hapmap];0.92[CHB][hapmap];0.90[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4705827	0.90[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.90[TSI][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4705828	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4705832	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4705833	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56030143	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56206672	0.88[ASN][1000 genomes]
rs57134656	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs58044020	0.82[ASN][1000 genomes]
rs58391392	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs60265545	0.86[EUR][1000 genomes]
rs60871281	0.82[ASN][1000 genomes]
rs60914066	0.80[ASN][1000 genomes]
rs6594718	0.81[EUR][1000 genomes]
rs6594719	0.81[EUR][1000 genomes]
rs6594721	0.89[CEU][hapmap];0.92[CHB][hapmap];0.90[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6594729	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6594732	0.90[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6594733	0.90[CEU][hapmap];0.93[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];0.91[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6594734	0.82[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.82[ASN][1000 genomes]
rs6594735	0.93[CHB][hapmap];0.84[CHD][hapmap];0.87[MEX][hapmap]
rs6594738	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs67915940	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6865809	0.90[CEU][hapmap];0.86[CHB][hapmap];0.89[JPT][hapmap];0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6867502	0.86[ASN][1000 genomes]
rs6876448	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6877432	0.88[ASW][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.82[JPT][hapmap];0.80[LWK][hapmap];0.87[MEX][hapmap];0.84[YRI][hapmap];0.82[ASN][1000 genomes]
rs6877466	0.86[ASN][1000 genomes]
rs6877834	0.86[ASN][1000 genomes]
rs6878282	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6878355	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6878900	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6880447	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6883383	0.83[ASW][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.83[LWK][hapmap];0.95[MEX][hapmap];0.81[YRI][hapmap];0.87[ASN][1000 genomes]
rs6883557	0.87[ASN][1000 genomes]
rs6884704	0.83[CEU][hapmap]
rs6886199	0.86[CHB][hapmap];0.84[CHD][hapmap];0.87[MEX][hapmap]
rs6886628	0.82[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.86[ASN][1000 genomes]
rs6887816	0.90[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6889501	0.82[ASN][1000 genomes]
rs6889574	0.82[ASW][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];1.00[JPT][hapmap];0.95[MEX][hapmap];0.82[ASN][1000 genomes]
rs6889783	0.86[EUR][1000 genomes]
rs6898425	0.81[CEU][hapmap];0.93[CHB][hapmap];0.92[JPT][hapmap];0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs72805422	0.82[ASN][1000 genomes]
rs7349799	1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[YRI][hapmap];0.80[ASN][1000 genomes]
rs754573	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7701913	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7704170	0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7705562	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7706215	0.82[ASN][1000 genomes]
rs7706958	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs7707895	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7709110	1.00[JPT][hapmap];0.91[MEX][hapmap]
rs7711078	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7711211	0.88[ASW][hapmap];0.93[CHB][hapmap];0.93[CHD][hapmap];0.92[JPT][hapmap];0.80[LWK][hapmap];0.95[MEX][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs7711367	0.88[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.80[LWK][hapmap];0.95[MEX][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs7713038	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7713451	0.94[ASW][hapmap];0.90[CEU][hapmap];1.00[CHB][hapmap];0.93[CHD][hapmap];0.88[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7713846	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7715601	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7717644	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7722918	0.86[ASN][1000 genomes]
rs7729306	0.94[ASW][hapmap];0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.96[TSI][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7730532	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7730557	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7730801	0.91[JPT][hapmap]
rs7730949	0.94[ASW][hapmap];0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7732310	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7737023	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs919304	0.83[ASW][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.91[JPT][hapmap];0.83[LWK][hapmap];0.95[MEX][hapmap];0.81[YRI][hapmap];0.87[ASN][1000 genomes]
rs929774	0.89[CEU][hapmap];0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9326893	1.00[CHB][hapmap];0.91[JPT][hapmap];0.81[YRI][hapmap];0.86[ASN][1000 genomes]
rs9326897	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9654519	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs9885245	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882721	chr5:112859994-112963488	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv1033202	chr5:112891857-112945992	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
3	nsv520674	chr5:112911165-112942820	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
4	esv2752057	chr5:112916398-112945992	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
5	nsv1029507	chr5:112916398-112945992	Strong transcription Weak transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
6	esv2763910	chr5:112916398-112951827	Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases
7	nsv1031336	chr5:112916398-112956588	Weak transcription Strong transcription Enhancers Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs7723108	YTHDC2	cis	parietal	SCAN
rs7723108	YTHDC2	cis	multi-tissue	Pritchard
rs7723108	CDO1	cis	cerebellum	SCAN
rs7723108	YTHDC2	cis	cerebellum	SCAN

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:112910600-112942000	Weak transcription	Brain Substantia Nigra	brain
2	chr5:112910800-112938200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:112910800-112942200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr5:112917200-112942000	Weak transcription	K562	blood
5	chr5:112918000-112939000	Weak transcription	NHEK	skin
6	chr5:112920400-112939000	Weak transcription	HMEC	breast
7	chr5:112920800-112938600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr5:112920800-112942000	Weak transcription	Ovary	ovary
9	chr5:112927200-112941800	Weak transcription	HUVEC	blood vessel
10	chr5:112927800-112939200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr5:112929200-112941400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
12	chr5:112929800-112942000	Weak transcription	NH-A	brain
13	chr5:112929800-112943800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr5:112930000-112941800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr5:112930000-112941800	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr5:112930000-112942000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr5:112930000-112942200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
18	chr5:112930000-112943800	Weak transcription	Muscle Satellite Cultured Cells	--
19	chr5:112930000-112944000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr5:112930200-112942000	Weak transcription	Left Ventricle	heart
21	chr5:112930200-112944000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr5:112930400-112942000	Weak transcription	A549	lung
23	chr5:112930800-112942200	Weak transcription	Brain Hippocampus Middle	brain
24	chr5:112931400-112943600	Weak transcription	NHDF-Ad	bronchial
25	chr5:112931800-112941800	Weak transcription	Placenta	Placenta
26	chr5:112931800-112943600	Weak transcription	Dnd41	blood
27	chr5:112932000-112939800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
28	chr5:112932600-112942200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr5:112933600-112941800	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr5:112933600-112942000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr5:112933800-112940000	Weak transcription	HSMM	muscle
32	chr5:112933800-112943800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr5:112934000-112938600	Weak transcription	Brain Angular Gyrus	brain
34	chr5:112937200-112941800	Weak transcription	Right Atrium	heart

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