Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10867826	0.86[JPT][hapmap]
rs11139497	0.85[ASN][1000 genomes]
rs11139500	0.91[ASN][1000 genomes]
rs1200754	0.81[EUR][1000 genomes]
rs1209749	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12338960	0.95[JPT][hapmap]
rs1319017	0.82[ASN][1000 genomes]
rs1327253	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2767711	0.81[EUR][1000 genomes]
rs2767713	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2767714	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2767715	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2767716	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2767717	0.84[ASN][1000 genomes]
rs2767719	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2788114	0.81[EUR][1000 genomes]
rs2788115	0.81[EUR][1000 genomes]
rs2788116	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2788117	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs34685815	0.92[ASN][1000 genomes]
rs4442221	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6559650	1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7853615	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7853639	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs986510	0.82[EUR][1000 genomes]
rs995173	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049305	chr9:84667596-84918690	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv831640	chr9:84695958-84880535	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:84763800-84766200	Enhancers	NHDF-Ad	bronchial
2	chr9:84764600-84766200	Weak transcription	NH-A	brain
3	chr9:84764600-84766800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr9:84764600-84767000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr9:84764800-84766000	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr9:84764800-84766800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr9:84764800-84766800	Weak transcription	NHLF	lung
8	chr9:84764800-84767800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr9:84765200-84766200	Enhancers	Fetal Kidney	kidney
10	chr9:84765600-84766800	Weak transcription	Osteobl	bone
11	chr9:84765600-84768000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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