Variant report

Variant rs555798
Chromosome Location chr1:172140760-172140761
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172123400-172149200 Weak transcription Brain Anterior Caudate brain
2 chr1:172128400-172149800 Weak transcription Aorta Aorta
3 chr1:172132800-172150000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:172138000-172141200 Weak transcription Right Ventricle heart
5 chr1:172138000-172141400 Weak transcription HSMM muscle
6 chr1:172138000-172141400 Weak transcription NHLF lung
7 chr1:172138000-172143600 Weak transcription Fetal Brain Male brain
8 chr1:172138200-172147800 Weak transcription Brain Angular Gyrus brain
9 chr1:172138400-172141800 Weak transcription Osteobl bone
10 chr1:172138400-172145000 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:172138400-172149800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:172138600-172141400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr1:172138600-172141800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:172138600-172143600 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr1:172138600-172147600 Weak transcription Small Intestine intestine
16 chr1:172138600-172147800 Weak transcription Brain Hippocampus Middle brain
17 chr1:172138600-172147800 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:172139600-172140800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:172139600-172148000 Weak transcription Fetal Stomach stomach
20 chr1:172140200-172146800 Weak transcription Fetal Intestine Small intestine
21 chr1:172140600-172140800 Enhancers Brain Substantia Nigra brain

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