The 2.0 version of rSNPBase

Variant report

Variant rs55787543
Chromosome Location chr11:72629232-72629233
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72577200-72651600 Weak transcription Gastric stomach
2 chr11:72597200-72634200 Weak transcription NHLF lung
3 chr11:72599400-72632400 Weak transcription HUVEC blood vessel
4 chr11:72600800-72632600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr11:72600800-72653200 Weak transcription Lung lung
6 chr11:72601000-72636800 Weak transcription Spleen Spleen
7 chr11:72601000-72641200 Weak transcription HSMMtube muscle
8 chr11:72601200-72636000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr11:72601400-72632400 Weak transcription Ovary ovary
10 chr11:72601800-72636000 Weak transcription Osteobl bone
11 chr11:72602200-72636800 Weak transcription Left Ventricle heart
12 chr11:72607000-72643000 Weak transcription HSMM muscle
13 chr11:72612400-72649000 Weak transcription Aorta Aorta
14 chr11:72614200-72640400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr11:72615800-72631400 Weak transcription Liver Liver
16 chr11:72618400-72636000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr11:72619600-72641400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr11:72620200-72636800 Weak transcription Right Atrium heart
19 chr11:72621000-72651000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr11:72623600-72632000 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr11:72623600-72643400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:72623800-72636800 Weak transcription Psoas Muscle Psoas
23 chr11:72624000-72632000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr11:72624200-72631800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr11:72624200-72654400 Weak transcription Duodenum Mucosa Duodenum
26 chr11:72624400-72631200 Weak transcription Dnd41 blood
27 chr11:72624400-72631200 Weak transcription HepG2 liver
28 chr11:72624400-72632600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr11:72624400-72652000 Weak transcription Fetal Muscle Trunk muscle
30 chr11:72624600-72631200 Weak transcription Brain Hippocampus Middle brain
31 chr11:72624600-72631400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr11:72624600-72631800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr11:72624600-72632000 Weak transcription Primary T cells from cord blood blood
34 chr11:72624600-72632000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr11:72624600-72632400 Weak transcription Primary T cells fromperipheralblood blood
36 chr11:72624600-72634800 Weak transcription Thymus Thymus
37 chr11:72624600-72635600 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr11:72624800-72632600 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr11:72624800-72635800 Weak transcription Muscle Satellite Cultured Cells --
40 chr11:72625000-72630000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr11:72625600-72646000 Weak transcription Fetal Lung lung
42 chr11:72625800-72633600 Strong transcription Primary B cells from peripheral blood blood
43 chr11:72625800-72640400 Weak transcription Fetal Stomach stomach
44 chr11:72626000-72633400 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr11:72626600-72630600 Weak transcription Brain Anterior Caudate brain
46 chr11:72626600-72632400 Weak transcription Fetal Heart heart
47 chr11:72626600-72635000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr11:72626800-72631400 Weak transcription Fetal Thymus thymus
49 chr11:72627000-72630000 Weak transcription Primary monocytes fromperipheralblood blood
50 chr11:72627000-72633600 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015