The 2.0 version of rSNPBase

Variant report

Variant rs58092588
Chromosome Location chr14:71028678-71028679
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:70988000-71029800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr14:70988800-71028800 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr14:70990400-71029600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr14:70991600-71028800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr14:70999800-71029200 Weak transcription Brain Anterior Caudate brain
6 chr14:70999800-71030200 Weak transcription Brain Angular Gyrus brain
7 chr14:71000000-71028800 Weak transcription Primary T cells from cord blood blood
8 chr14:71004000-71030200 Weak transcription Rectal Smooth Muscle rectum
9 chr14:71004200-71034600 Weak transcription Brain Substantia Nigra brain
10 chr14:71004400-71029800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr14:71004400-71030000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr14:71007000-71029200 Weak transcription Primary T cells fromperipheralblood blood
13 chr14:71010800-71029000 Weak transcription Fetal Lung lung
14 chr14:71012200-71028800 Weak transcription Aorta Aorta
15 chr14:71020000-71029200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr14:71020800-71032000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr14:71022800-71029200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr14:71022800-71029400 Weak transcription HSMM muscle
19 chr14:71022800-71047000 Weak transcription Muscle Satellite Cultured Cells --
20 chr14:71023000-71029000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr14:71023000-71045800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr14:71023200-71028800 Weak transcription Pancreas Pancrea
23 chr14:71023200-71029200 Weak transcription Osteobl bone
24 chr14:71023200-71029800 Weak transcription Left Ventricle heart
25 chr14:71023200-71029800 Weak transcription Right Ventricle heart
26 chr14:71023200-71034000 Weak transcription NHEK skin
27 chr14:71023200-71050400 Weak transcription Gastric stomach
28 chr14:71025400-71030200 Weak transcription HSMMtube muscle
29 chr14:71025400-71047600 Weak transcription NH-A brain
30 chr14:71026400-71030200 Weak transcription Psoas Muscle Psoas
31 chr14:71026400-71047000 Weak transcription Colon Smooth Muscle Colon
32 chr14:71026600-71028800 Weak transcription Placenta Amnion Placenta Amnion
33 chr14:71026800-71035200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr14:71027400-71029200 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr14:71027400-71029400 ZNF genes & repeats Primary B cells from peripheral blood blood
36 chr14:71027400-71031000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr14:71027400-71047200 Weak transcription NHLF lung
38 chr14:71027600-71029600 Weak transcription Fetal Kidney kidney
39 chr14:71027600-71032000 Strong transcription Breast Myoepithelial Primary Cells Breast
40 chr14:71027800-71034200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr14:71028000-71029000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
42 chr14:71028000-71029000 ZNF genes & repeats Liver Liver
43 chr14:71028000-71030800 Strong transcription Skeletal Muscle Male skeletal muscle
44 chr14:71028000-71031200 ZNF genes & repeats Primary B cells from cord blood blood
45 chr14:71028000-71032800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr14:71028200-71028800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
47 chr14:71028200-71028800 ZNF genes & repeats Ovary ovary
48 chr14:71028200-71029000 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
49 chr14:71028200-71029000 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
50 chr14:71028200-71029000 ZNF genes & repeats Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015