Variant report

Variant	rs57339942
Chromosome Location	chr14:71083307-71083308
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 108 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:108)

rs_ID	r²[population]
rs10129782	0.87[ASN][1000 genomes]
rs10131716	0.87[ASN][1000 genomes]
rs10133963	0.86[ASN][1000 genomes]
rs10135356	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10143254	0.87[ASN][1000 genomes]
rs10144535	0.82[ASN][1000 genomes]
rs10144696	0.87[ASN][1000 genomes]
rs10147143	0.87[ASN][1000 genomes]
rs10150160	0.85[ASN][1000 genomes]
rs10483830	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10483832	0.87[ASN][1000 genomes]
rs11158863	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12586299	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12586392	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12586441	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12587666	0.80[ASN][1000 genomes]
rs12587714	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12587866	0.87[ASN][1000 genomes]
rs12588723	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12589512	0.85[ASN][1000 genomes]
rs12590117	0.87[ASN][1000 genomes]
rs12590198	0.87[ASN][1000 genomes]
rs12590217	0.87[ASN][1000 genomes]
rs12590610	0.81[ASN][1000 genomes]
rs17108197	0.80[ASN][1000 genomes]
rs17108201	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17108246	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17108264	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17108267	0.87[ASN][1000 genomes]
rs17108274	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17108276	0.87[ASN][1000 genomes]
rs17108278	0.87[ASN][1000 genomes]
rs17108280	0.87[ASN][1000 genomes]
rs17108291	0.82[ASN][1000 genomes]
rs17113651	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1959477	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2018131	0.85[ASN][1000 genomes]
rs2185146	0.82[ASN][1000 genomes]
rs2332431	0.87[ASN][1000 genomes]
rs2332432	0.99[ASN][1000 genomes]
rs28559756	0.80[ASN][1000 genomes]
rs28612538	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2877672	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs45523543	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55913411	0.81[AFR][1000 genomes]
rs55965222	0.87[ASN][1000 genomes]
rs56155089	0.87[ASN][1000 genomes]
rs56322604	0.87[ASN][1000 genomes]
rs56328037	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56392092	0.80[ASN][1000 genomes]
rs56687536	0.87[ASN][1000 genomes]
rs56721095	0.81[ASN][1000 genomes]
rs56922268	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs57032041	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57598551	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs58069917	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs58092588	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58777530	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58919501	0.87[ASN][1000 genomes]
rs59044667	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59115232	0.87[ASN][1000 genomes]
rs59233924	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs59475121	0.87[ASN][1000 genomes]
rs59599422	0.87[ASN][1000 genomes]
rs60120955	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60251828	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60370428	0.87[ASN][1000 genomes]
rs60453577	0.87[ASN][1000 genomes]
rs60555424	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60860517	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60862805	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs60867605	0.86[ASN][1000 genomes]
rs61388426	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs66572616	1.00[ASN][1000 genomes]
rs7141056	0.85[ASN][1000 genomes]
rs7141713	0.87[ASN][1000 genomes]
rs7141730	0.87[ASN][1000 genomes]
rs7145530	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7146127	0.85[ASN][1000 genomes]
rs7150354	0.80[ASN][1000 genomes]
rs7154904	0.80[ASN][1000 genomes]
rs7155088	0.87[ASN][1000 genomes]
rs7155436	0.87[ASN][1000 genomes]
rs7156661	0.86[ASN][1000 genomes]
rs7157073	0.87[ASN][1000 genomes]
rs7157455	0.87[ASN][1000 genomes]
rs7157618	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7157685	0.86[ASN][1000 genomes]
rs7158201	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73282126	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73282127	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73282153	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73283917	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7359112	0.87[ASN][1000 genomes]
rs74062726	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74062730	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74062733	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74062743	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74062746	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74062750	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74062769	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8004054	0.82[ASN][1000 genomes]
rs8005893	0.87[ASN][1000 genomes]
rs8006487	0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8010473	0.89[EUR][1000 genomes]
rs8012025	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8016953	0.80[ASN][1000 genomes]
rs8021911	0.86[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71080800-71084200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71083000-71084000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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