Variant report

Variant	rs12586392
Chromosome Location	chr14:71085469-71085470
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 87 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10129782	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs10131716	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs10135356	0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10147143	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs10150160	0.80[ASN][1000 genomes]
rs10483830	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10483832	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs11158863	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12586299	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12586325	0.88[CEU][hapmap]
rs12586328	0.88[CEU][hapmap]
rs12586441	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12587714	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12587866	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs12588723	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12589512	0.93[ASN][1000 genomes]
rs12590117	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs12590198	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs12590217	0.86[CHB][hapmap];0.81[JPT][hapmap]
rs12590401	0.84[CHB][hapmap];0.86[JPT][hapmap]
rs12590610	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs1538403	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs17108201	0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs17108246	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs17108264	1.00[CEU][hapmap];0.95[CHB][hapmap];0.91[JPT][hapmap];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17108274	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17108280	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs17113651	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1953798	0.86[CEU][hapmap]
rs1959477	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1959483	0.86[CEU][hapmap]
rs1962311	0.81[CHB][hapmap]
rs2332431	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs2332432	0.89[ASN][1000 genomes]
rs28612538	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs28710847	0.81[ASN][1000 genomes]
rs2877672	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs45523543	0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4902817	0.88[CEU][hapmap]
rs56328037	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs56922268	0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57032041	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs57339942	0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs57598551	0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58069917	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58092588	0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs58777530	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59044667	0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs59233924	0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60120955	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60251828	0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60555424	0.99[EUR][1000 genomes]
rs60860517	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs60862805	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61388426	0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66572616	0.90[ASN][1000 genomes]
rs7141056	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs7141713	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs7141730	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7145530	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7150354	0.84[CHB][hapmap];0.89[JPT][hapmap]
rs7154904	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs7155088	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7155436	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7156661	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs7157618	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7157685	0.86[CHB][hapmap];0.86[JPT][hapmap]
rs7158201	0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73282126	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73282127	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73282153	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73283917	0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs74062726	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs74062730	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs74062733	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs74062743	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74062746	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74062750	0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs74062769	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs8004054	0.83[ASN][1000 genomes]
rs8005893	0.86[CHB][hapmap];0.87[JPT][hapmap]
rs8006487	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8010473	0.88[EUR][1000 genomes]
rs8012025	0.93[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8014252	0.86[CEU][hapmap]
rs8016356	0.81[ASN][1000 genomes]
rs8021911	0.85[CHB][hapmap];0.91[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71084400-71088400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71085400-71088000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr14:71085400-71091600	Weak transcription	HSMMtube	muscle

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