Variant report

Variant	rs7141056
Chromosome Location	chr14:71069691-71069692
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:71063881..71065934-chr14:71068184..71070871,2	K562	blood:
2	chr14:71068006..71069934-chr5:139842681..139845055,2	MCF-7	breast:
3	chr14:71067728..71070512-chr14:71142733..71145448,2	K562	blood:

Variant related genes	Relation type
ENSG00000133997	Chromatin interaction

Extended variants
information (count: 116 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:116)

rs_ID	r²[population]
rs1007402	0.94[CEU][hapmap];0.85[CHB][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10129782	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10130071	0.81[ASN][1000 genomes]
rs10131716	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10131740	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10132252	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10133963	0.97[ASN][1000 genomes]
rs10134004	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10135356	0.80[ASN][1000 genomes]
rs10140087	0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10141744	0.84[ASN][1000 genomes]
rs10143254	0.98[ASN][1000 genomes]
rs10144289	0.89[CEU][hapmap];0.90[CHB][hapmap];0.81[ASN][1000 genomes]
rs10144535	0.93[ASN][1000 genomes]
rs10144653	0.90[CEU][hapmap];0.81[ASN][1000 genomes]
rs10144696	0.98[ASN][1000 genomes]
rs10147143	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs10150160	0.96[ASN][1000 genomes]
rs10151905	0.86[ASN][1000 genomes]
rs10483830	0.91[CHB][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs10483832	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1057127	0.83[ASN][1000 genomes]
rs10873239	0.90[ASN][1000 genomes]
rs1112478	0.83[ASN][1000 genomes]
rs11158867	0.94[CEU][hapmap];0.90[CHB][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1137491	0.85[ASN][1000 genomes]
rs12587666	0.90[ASN][1000 genomes]
rs12587866	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12590117	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12590198	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12590217	1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[ASN][1000 genomes]
rs12590401	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12590471	0.90[CHB][hapmap]
rs12590610	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs1538403	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs17108197	0.92[ASN][1000 genomes]
rs17108246	0.90[CHB][hapmap];0.91[JPT][hapmap];0.84[ASN][1000 genomes]
rs17108264	1.00[CHB][hapmap];0.96[JPT][hapmap];0.85[ASN][1000 genomes]
rs17108267	0.98[ASN][1000 genomes]
rs17108274	0.90[CHB][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs17108276	0.98[ASN][1000 genomes]
rs17108278	0.98[ASN][1000 genomes]
rs17108280	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs17113651	0.95[CHB][hapmap];0.95[JPT][hapmap];0.85[ASN][1000 genomes]
rs1953803	0.91[ASN][1000 genomes]
rs1962311	1.00[CEU][hapmap];0.85[CHB][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1962312	0.85[ASN][1000 genomes]
rs2153114	1.00[CEU][hapmap];0.90[CHB][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2332431	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs2332432	0.86[ASN][1000 genomes]
rs28559756	0.92[ASN][1000 genomes]
rs28612538	0.81[ASN][1000 genomes]
rs28754483	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2877673	0.85[ASN][1000 genomes]
rs45523543	0.85[ASN][1000 genomes]
rs55965222	0.98[ASN][1000 genomes]
rs56155089	0.98[ASN][1000 genomes]
rs56322604	0.98[ASN][1000 genomes]
rs56328037	0.84[ASN][1000 genomes]
rs56392092	0.90[ASN][1000 genomes]
rs56687536	0.98[ASN][1000 genomes]
rs56721095	0.91[ASN][1000 genomes]
rs56922268	0.85[ASN][1000 genomes]
rs57339942	0.85[ASN][1000 genomes]
rs57598551	0.85[ASN][1000 genomes]
rs58069917	0.84[ASN][1000 genomes]
rs58092588	0.81[ASN][1000 genomes]
rs58258245	0.84[ASN][1000 genomes]
rs58919501	0.98[ASN][1000 genomes]
rs59044667	0.84[ASN][1000 genomes]
rs59115232	0.98[ASN][1000 genomes]
rs59233924	0.85[ASN][1000 genomes]
rs59475121	0.98[ASN][1000 genomes]
rs59599422	0.98[ASN][1000 genomes]
rs60120955	0.85[ASN][1000 genomes]
rs60251828	0.85[ASN][1000 genomes]
rs60370428	0.98[ASN][1000 genomes]
rs60453577	0.98[ASN][1000 genomes]
rs60848570	0.88[ASN][1000 genomes]
rs60860517	0.81[ASN][1000 genomes]
rs60867605	0.97[ASN][1000 genomes]
rs60870618	0.91[ASN][1000 genomes]
rs61388426	0.84[ASN][1000 genomes]
rs6420902	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6573972	0.81[ASN][1000 genomes]
rs6573973	0.84[ASN][1000 genomes]
rs66572616	0.85[ASN][1000 genomes]
rs67193638	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7141562	0.84[ASN][1000 genomes]
rs7141713	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7141730	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7146127	0.85[AMR][1000 genomes]
rs7150354	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7150545	0.84[ASN][1000 genomes]
rs7154858	0.90[CHB][hapmap]
rs7154904	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7155088	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7155436	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7156661	1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[YRI][hapmap];0.91[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs7157073	0.98[ASN][1000 genomes]
rs7157455	0.98[ASN][1000 genomes]
rs7157685	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs7158848	0.90[CHB][hapmap];0.84[ASN][1000 genomes]
rs7359112	0.98[ASN][1000 genomes]
rs74062743	0.81[ASN][1000 genomes]
rs74062746	0.81[ASN][1000 genomes]
rs74062750	0.81[ASN][1000 genomes]
rs74062769	0.85[ASN][1000 genomes]
rs8004054	0.92[ASN][1000 genomes]
rs8005893	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs8010044	0.90[CHB][hapmap];0.85[ASN][1000 genomes]
rs8011847	0.81[ASN][1000 genomes]
rs8016953	0.92[ASN][1000 genomes]
rs8018765	0.84[ASN][1000 genomes]
rs8021911	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs9323542	0.90[CHB][hapmap];0.84[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71068400-71078600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr14:71068800-71069800	Enhancers	GM12878-XiMat	blood

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