Variant report

Variant	rs12586299
Chromosome Location	chr14:71085215-71085216
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 113 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:113)

rs_ID	r²[population]
rs10129782	0.90[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs10131716	0.90[CHB][hapmap];0.85[JPT][hapmap];0.82[ASN][1000 genomes]
rs10133963	0.81[ASN][1000 genomes]
rs10135356	0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10143254	0.82[ASN][1000 genomes]
rs10144289	0.81[CHB][hapmap]
rs10144696	0.82[ASN][1000 genomes]
rs10147143	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs10150160	0.84[ASN][1000 genomes]
rs10483830	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10483832	0.90[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs11158863	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11158867	0.81[CHB][hapmap]
rs12586325	0.88[CEU][hapmap]
rs12586328	0.88[CEU][hapmap]
rs12586392	0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12586441	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12587714	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12587866	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs12588723	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12589512	0.89[ASN][1000 genomes]
rs12590117	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs12590198	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs12590217	0.90[CHB][hapmap];0.80[JPT][hapmap];0.82[ASN][1000 genomes]
rs12590401	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs12590471	0.81[CHB][hapmap]
rs12590610	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs1538403	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs17108201	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17108246	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17108264	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17108267	0.82[ASN][1000 genomes]
rs17108274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17108276	0.82[ASN][1000 genomes]
rs17108278	0.82[ASN][1000 genomes]
rs17108280	0.90[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs17113651	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1953798	0.87[CEU][hapmap]
rs1959477	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1959483	0.87[CEU][hapmap]
rs2153114	0.81[CHB][hapmap]
rs2332431	0.90[CHB][hapmap];0.90[JPT][hapmap];0.82[ASN][1000 genomes]
rs2332432	0.93[ASN][1000 genomes]
rs28612538	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2877672	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs45523543	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4902817	0.88[CEU][hapmap]
rs55965222	0.82[ASN][1000 genomes]
rs56155089	0.82[ASN][1000 genomes]
rs56322604	0.82[ASN][1000 genomes]
rs56328037	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs56687536	0.82[ASN][1000 genomes]
rs56922268	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs57032041	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs57339942	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57598551	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58069917	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58092588	1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs58777530	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58919501	0.82[ASN][1000 genomes]
rs59044667	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59115232	0.82[ASN][1000 genomes]
rs59233924	0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs59475121	0.82[ASN][1000 genomes]
rs59599422	0.82[ASN][1000 genomes]
rs60120955	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60251828	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs60370428	0.82[ASN][1000 genomes]
rs60453577	0.82[ASN][1000 genomes]
rs60555424	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60860517	0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60862805	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs60867605	0.80[ASN][1000 genomes]
rs61388426	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6420902	0.81[CHB][hapmap]
rs66572616	0.94[ASN][1000 genomes]
rs7141056	0.90[CHB][hapmap];0.86[JPT][hapmap]
rs7141713	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs7141730	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs7145530	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7150354	0.89[CHB][hapmap];0.89[JPT][hapmap]
rs7154858	0.81[CHB][hapmap]
rs7154904	0.94[CHB][hapmap];0.88[JPT][hapmap]
rs7155088	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs7155436	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs7156661	0.90[CHB][hapmap];0.85[JPT][hapmap];0.81[ASN][1000 genomes]
rs7157073	0.82[ASN][1000 genomes]
rs7157455	0.82[ASN][1000 genomes]
rs7157618	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7157685	0.90[CHB][hapmap];0.86[JPT][hapmap];0.81[ASN][1000 genomes]
rs7158201	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7158848	0.81[CHB][hapmap]
rs73282126	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73282127	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73282153	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs73283917	1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7359112	0.82[ASN][1000 genomes]
rs74062726	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs74062730	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs74062733	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs74062743	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs74062746	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs74062750	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs74062769	0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8004054	0.87[ASN][1000 genomes]
rs8005893	0.90[CHB][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs8006487	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8010044	0.81[CHB][hapmap]
rs8010473	0.89[EUR][1000 genomes]
rs8012025	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8014252	0.87[CEU][hapmap]
rs8021911	0.90[CHB][hapmap];0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs9323542	0.81[CHB][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:71084200-71085400	Enhancers	HSMMtube	muscle
2	chr14:71084400-71088400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr14:71084800-71085400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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