Variant report

Variant rs588009
Chromosome Location chr6:80960466-80960467
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80914600-80980400 Weak transcription Ovary ovary
2 chr6:80921400-80973200 Weak transcription Primary B cells from cord blood blood
3 chr6:80922200-80964200 Weak transcription Fetal Intestine Small intestine
4 chr6:80924000-80968400 Weak transcription Gastric stomach
5 chr6:80924000-80976000 Weak transcription HSMM muscle
6 chr6:80929400-80969200 Weak transcription Left Ventricle heart
7 chr6:80939000-80974800 Weak transcription Primary T cells from cord blood blood
8 chr6:80940600-80964200 Weak transcription Liver Liver
9 chr6:80944000-80982800 Weak transcription Pancreas Pancrea
10 chr6:80944400-80961600 Weak transcription Colon Smooth Muscle Colon
11 chr6:80944600-80977200 Weak transcription Fetal Stomach stomach
12 chr6:80956600-80971000 Weak transcription Lung lung
13 chr6:80956800-80964200 Weak transcription Brain Angular Gyrus brain
14 chr6:80957600-80964400 Weak transcription Brain Hippocampus Middle brain
15 chr6:80957600-80975200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr6:80957800-80964400 Weak transcription Brain Substantia Nigra brain
17 chr6:80958200-80961200 Enhancers K562 blood
18 chr6:80958800-80960600 Enhancers Muscle Satellite Cultured Cells --
19 chr6:80958800-80968600 Weak transcription Fetal Heart heart
20 chr6:80959200-80960600 Enhancers Osteobl bone
21 chr6:80959200-80960800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr6:80959200-80960800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr6:80959200-80960800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr6:80959400-80960600 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr6:80959600-80960600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr6:80959800-80960600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr6:80959800-80960600 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr6:80960200-80960600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr6:80960200-80961200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr6:80960400-80962000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr6:80960400-80968000 Weak transcription Psoas Muscle Psoas
32 chr6:80960400-80971000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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