The 2.0 version of rSNPBase

Variant report

Variant rs59896565
Chromosome Location chr15:83809233-83809234
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:83777200-83834600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:83779400-83812800 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr15:83780000-83810000 Weak transcription Fetal Lung lung
4 chr15:83781200-83827200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr15:83781400-83809800 Weak transcription Brain Substantia Nigra brain
6 chr15:83782000-83825000 Weak transcription Psoas Muscle Psoas
7 chr15:83782200-83812400 Weak transcription Muscle Satellite Cultured Cells --
8 chr15:83782600-83833600 Weak transcription Right Ventricle heart
9 chr15:83783200-83812400 Weak transcription Brain Angular Gyrus brain
10 chr15:83783200-83812800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr15:83783400-83812800 Weak transcription Brain Cingulate Gyrus brain
12 chr15:83783800-83832400 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr15:83787000-83812200 Weak transcription H9 Cell Line embryonic stem cell
14 chr15:83788600-83815000 Weak transcription Pancreas Pancrea
15 chr15:83791600-83813400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr15:83792800-83835200 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr15:83793800-83812400 Weak transcription Thymus Thymus
18 chr15:83794600-83827400 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr15:83796200-83812400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr15:83796200-83826800 Weak transcription Duodenum Mucosa Duodenum
21 chr15:83796200-83832000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr15:83796400-83811800 Weak transcription Fetal Intestine Small intestine
23 chr15:83796400-83812200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:83796400-83833000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr15:83797200-83812400 Weak transcription Primary T cells from cord blood blood
26 chr15:83797400-83810000 Weak transcription Fetal Brain Male brain
27 chr15:83797600-83831800 Weak transcription Fetal Thymus thymus
28 chr15:83797800-83832800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr15:83798000-83809600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr15:83798600-83812400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr15:83799000-83811000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr15:83799000-83827200 Weak transcription Gastric stomach
33 chr15:83799200-83809600 Weak transcription Left Ventricle heart
34 chr15:83799200-83811000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr15:83799200-83812000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:83799200-83812200 Weak transcription Fetal Intestine Large intestine
37 chr15:83799400-83811800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr15:83799400-83812200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:83799400-83812200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr15:83799400-83812400 Weak transcription Spleen Spleen
41 chr15:83799600-83812400 Weak transcription Ovary ovary
42 chr15:83799600-83813000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr15:83799600-83826000 Weak transcription NHEK skin
44 chr15:83799800-83819200 Weak transcription NHDF-Ad bronchial
45 chr15:83800000-83818200 Weak transcription Placenta Placenta
46 chr15:83800000-83830000 Weak transcription Fetal Heart heart
47 chr15:83800200-83812400 Weak transcription Stomach Smooth Muscle stomach
48 chr15:83800400-83812200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr15:83800600-83811200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr15:83800800-83818600 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015