The 2.0 version of rSNPBase

Variant report

Variant rs60023497
Chromosome Location chr13:98044037-98044038
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:97995400-98050200 Weak transcription Small Intestine intestine
2 chr13:98020000-98045600 Weak transcription Hela-S3 cervix
3 chr13:98020200-98046000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:98020400-98048000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr13:98022000-98045600 Weak transcription Colonic Mucosa Colon
6 chr13:98022000-98048000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr13:98023600-98045400 Strong transcription Breast Myoepithelial Primary Cells Breast
8 chr13:98024000-98044600 Weak transcription GM12878-XiMat blood
9 chr13:98026400-98045200 Weak transcription Fetal Brain Male brain
10 chr13:98027800-98048000 Weak transcription K562 blood
11 chr13:98028000-98056400 Weak transcription Psoas Muscle Psoas
12 chr13:98028200-98046200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr13:98028200-98048000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr13:98028200-98048000 Weak transcription Fetal Kidney kidney
15 chr13:98028400-98047600 Weak transcription HMEC breast
16 chr13:98028600-98046800 Weak transcription A549 lung
17 chr13:98029400-98046800 Weak transcription NHLF lung
18 chr13:98037600-98048000 Weak transcription Aorta Aorta
19 chr13:98038600-98049400 Weak transcription Rectal Smooth Muscle rectum
20 chr13:98039200-98045400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr13:98039200-98045800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr13:98039600-98054400 Weak transcription Primary T cells from cord blood blood
23 chr13:98040000-98046800 Weak transcription Right Ventricle heart
24 chr13:98040000-98048200 Weak transcription Right Atrium heart
25 chr13:98040000-98049800 Weak transcription Lung lung
26 chr13:98040200-98044800 Weak transcription Thymus Thymus
27 chr13:98040200-98049000 Weak transcription Brain Angular Gyrus brain
28 chr13:98040200-98049400 Weak transcription Stomach Smooth Muscle stomach
29 chr13:98040400-98047800 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr13:98041000-98046200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr13:98041000-98046800 Weak transcription Ovary ovary
32 chr13:98041000-98046800 Weak transcription Pancreas Pancrea
33 chr13:98041000-98048200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr13:98041400-98044200 Weak transcription Primary monocytes fromperipheralblood blood
35 chr13:98041400-98046200 Weak transcription Brain Hippocampus Middle brain
36 chr13:98041400-98046800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr13:98041400-98049000 Weak transcription Brain Cingulate Gyrus brain
38 chr13:98041400-98049200 Weak transcription Colon Smooth Muscle Colon
39 chr13:98041400-98050200 Weak transcription Fetal Stomach stomach
40 chr13:98041600-98044200 Weak transcription Brain Substantia Nigra brain
41 chr13:98041800-98050800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr13:98042000-98045000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr13:98042000-98049000 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr13:98042000-98052800 Weak transcription Fetal Muscle Leg muscle
45 chr13:98042400-98044600 Strong transcription HUVEC blood vessel
46 chr13:98042600-98044400 Strong transcription Primary T cells fromperipheralblood blood
47 chr13:98042600-98044400 Strong transcription Primary T helper cells PMA-I stimulated --
48 chr13:98042800-98044200 Strong transcription Skeletal Muscle Female skeletal muscle
49 chr13:98042800-98044400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr13:98043000-98044400 Genic enhancers Fetal Lung lung

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Last update: Aug 31, 2015