Variant report

Variant rs6048764
Chromosome Location chr20:23349238-23349239
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23342400-23352600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr20:23344000-23392600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr20:23344400-23350200 Weak transcription Fetal Kidney kidney
4 chr20:23344600-23354200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr20:23344800-23362400 Strong transcription HUES64 Cell Line embryonic stem cell
6 chr20:23345000-23349600 Genic enhancers HepG2 liver
7 chr20:23345000-23361800 Strong transcription Fetal Thymus thymus
8 chr20:23345000-23362000 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr20:23345000-23362600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr20:23346200-23349400 Genic enhancers HMEC breast
11 chr20:23346400-23349600 Genic enhancers K562 blood
12 chr20:23346400-23349800 Weak transcription H9 Cell Line embryonic stem cell
13 chr20:23346400-23350000 Weak transcription Aorta Aorta
14 chr20:23346600-23349400 Enhancers Liver Liver
15 chr20:23346600-23349600 Genic enhancers NHDF-Ad bronchial
16 chr20:23346600-23349800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr20:23346600-23363200 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr20:23346800-23349400 Weak transcription Fetal Intestine Large intestine
19 chr20:23346800-23349400 Weak transcription Thymus Thymus
20 chr20:23346800-23349600 Weak transcription Placenta Amnion Placenta Amnion
21 chr20:23346800-23349800 Weak transcription H1 Cell Line embryonic stem cell
22 chr20:23346800-23349800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr20:23346800-23349800 Weak transcription Gastric stomach
24 chr20:23346800-23349800 Weak transcription Ovary ovary
25 chr20:23346800-23349800 Weak transcription Pancreas Pancrea
26 chr20:23346800-23349800 Genic enhancers Osteobl bone
27 chr20:23346800-23350000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr20:23346800-23350000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr20:23346800-23350000 Weak transcription Esophagus oesophagus
30 chr20:23346800-23350000 Weak transcription Lung lung
31 chr20:23346800-23350400 Weak transcription Fetal Brain Male brain
32 chr20:23346800-23350800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr20:23346800-23362600 Weak transcription Right Atrium heart
34 chr20:23347000-23349400 Weak transcription Colonic Mucosa Colon
35 chr20:23347000-23349400 Weak transcription Left Ventricle heart
36 chr20:23347000-23349800 Genic enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr20:23347000-23350000 Weak transcription Fetal Stomach stomach
38 chr20:23347000-23350200 Weak transcription Fetal Intestine Small intestine
39 chr20:23347200-23349600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr20:23347200-23349600 Genic enhancers HSMM muscle
41 chr20:23347200-23362400 Strong transcription iPS-20b Cell Line embryonic stem cell
42 chr20:23347400-23349400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr20:23347400-23349600 Weak transcription Placenta Placenta
44 chr20:23347400-23362000 Strong transcription Rectal Mucosa Donor 29 rectum
45 chr20:23347600-23349400 Weak transcription Primary T cells fromperipheralblood blood
46 chr20:23347600-23349400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr20:23347600-23349400 Weak transcription Sigmoid Colon Sigmoid Colon
48 chr20:23347600-23349600 Weak transcription Stomach Smooth Muscle stomach
49 chr20:23347600-23349800 Weak transcription Spleen Spleen
50 chr20:23347600-23350000 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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