Variant report

Variant	rs61789426
Chromosome Location	chr4:20419936-20419937
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs16869577	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16869595	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1949139	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56058527	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56274585	0.80[ASN][1000 genomes]
rs61789383	0.83[EUR][1000 genomes]
rs61789388	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61789392	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61789395	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs61789400	0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61789402	1.00[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61789404	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61789406	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs61789408	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61789409	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61789410	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61789425	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61790785	1.00[AFR][1000 genomes]
rs61790831	1.00[AFR][1000 genomes]
rs61790832	1.00[AFR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20406200-20420000	Weak transcription	Fetal Lung	lung
2	chr4:20410200-20420200	Weak transcription	NHLF	lung
3	chr4:20414400-20422400	Weak transcription	Fetal Stomach	stomach
4	chr4:20417800-20420600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:20418600-20420400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr4:20419800-20420000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:20419800-20420000	Weak transcription	NHDF-Ad	bronchial
8	chr4:20419800-20420400	Enhancers	Duodenum Smooth Muscle	Duodenum

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