Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11773948	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1366966	0.83[EUR][1000 genomes]
rs1429673	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1429677	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1429679	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1429682	0.82[EUR][1000 genomes]
rs16873995	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16874116	0.82[EUR][1000 genomes]
rs1864318	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1864319	0.88[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs2082066	0.82[EUR][1000 genomes]
rs55739474	0.82[EUR][1000 genomes]
rs56098431	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs56141525	0.83[EUR][1000 genomes]
rs56172266	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57615676	0.82[EUR][1000 genomes]
rs62525730	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs62527371	0.94[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62527406	0.96[EUR][1000 genomes]
rs62527409	0.83[EUR][1000 genomes]
rs6469029	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6469036	0.82[EUR][1000 genomes]
rs6469037	0.81[EUR][1000 genomes]
rs6984942	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7007882	0.82[EUR][1000 genomes]
rs7841482	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs993176	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107013800-107031000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:107022400-107027400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr8:107024600-107027000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:107024800-107026800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:107024800-107027000	Weak transcription	NH-A	brain
6	chr8:107024800-107027000	Weak transcription	Osteobl	bone
7	chr8:107025000-107026800	Weak transcription	NHDF-Ad	bronchial
8	chr8:107025000-107027000	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr8:107025200-107026600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr8:107025200-107032600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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