Variant report

Variant	rs6457983
Chromosome Location	chr6:11933456-11933457
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10947661	0.97[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1205845	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1205849	0.89[AMR][1000 genomes]
rs1205850	0.89[AMR][1000 genomes]
rs1210621	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs169713	0.83[AMR][1000 genomes]
rs169714	0.88[AMR][1000 genomes]
rs209773	0.89[AMR][1000 genomes]
rs209774	0.88[AMR][1000 genomes]
rs209776	0.89[AMR][1000 genomes]
rs209780	0.84[AMR][1000 genomes]
rs209782	0.88[AMR][1000 genomes]
rs209784	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs209786	0.89[AMR][1000 genomes]
rs23805	0.88[AMR][1000 genomes]
rs6905403	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs848901	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs85219	0.86[AMR][1000 genomes]
rs864244	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9394412	0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11921600-11938600	Weak transcription	Right Atrium	heart
2	chr6:11933000-11933800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:11933200-11934200	Weak transcription	K562	blood
4	chr6:11933400-11933800	Active TSS	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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