The 2.0 version of rSNPBase

Variant report

Variant rs66535408
Chromosome Location chr15:49900040-49900041
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49893200-49906800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr15:49894600-49902800 Weak transcription Brain Inferior Temporal Lobe brain
3 chr15:49895600-49911400 Weak transcription Psoas Muscle Psoas
4 chr15:49895800-49907000 Weak transcription HSMM muscle
5 chr15:49896000-49912200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr15:49896200-49906600 Weak transcription Fetal Lung lung
7 chr15:49896400-49901000 Weak transcription Gastric stomach
8 chr15:49896600-49906200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr15:49896600-49912000 Weak transcription Brain Cingulate Gyrus brain
10 chr15:49896800-49907000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr15:49896800-49912000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr15:49897000-49911400 Weak transcription Stomach Smooth Muscle stomach
13 chr15:49897200-49907000 Weak transcription Liver Liver
14 chr15:49897600-49906200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr15:49897600-49906400 Weak transcription Primary B cells from cord blood blood
16 chr15:49897800-49906800 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr15:49897800-49907000 Weak transcription Left Ventricle heart
18 chr15:49897800-49911800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr15:49898000-49903800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:49898000-49906600 Weak transcription HSMMtube muscle
21 chr15:49898000-49907000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr15:49898000-49911600 Weak transcription Brain Substantia Nigra brain
23 chr15:49898200-49900200 Weak transcription Aorta Aorta
24 chr15:49898200-49900400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr15:49898200-49905400 Weak transcription Primary T cells fromperipheralblood blood
26 chr15:49898200-49906200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr15:49898200-49906600 Weak transcription Fetal Muscle Leg muscle
28 chr15:49898200-49907000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr15:49898200-49907000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr15:49898200-49907000 Weak transcription Fetal Intestine Small intestine
31 chr15:49898200-49907000 Weak transcription Thymus Thymus
32 chr15:49898200-49911400 Weak transcription Pancreas Pancrea
33 chr15:49898200-49911800 Weak transcription Fetal Intestine Large intestine
34 chr15:49898200-49912200 Weak transcription Fetal Stomach stomach
35 chr15:49898200-49912800 Weak transcription Esophagus oesophagus
36 chr15:49898400-49906800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr15:49898400-49911600 Weak transcription Brain Hippocampus Middle brain
38 chr15:49898400-49912000 Weak transcription Right Ventricle heart
39 chr15:49898600-49906000 Weak transcription Primary T cells from cord blood blood
40 chr15:49898800-49900200 Enhancers NHDF-Ad bronchial
41 chr15:49898800-49904600 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr15:49899000-49900400 Strong transcription Primary hematopoietic stem cells blood
43 chr15:49899000-49901000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr15:49899000-49907000 Weak transcription Ovary ovary
45 chr15:49899000-49912000 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr15:49899200-49905200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr15:49899600-49906600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr15:49899800-49902000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr15:49899800-49904600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr15:49899800-49910800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015