The 2.0 version of rSNPBase

Variant report

Variant rs6661028
Chromosome Location chr1:92939213-92939214
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92925600-92946000 Weak transcription Right Atrium heart
2 chr1:92929400-92940600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr1:92929600-92940800 Weak transcription Duodenum Mucosa Duodenum
4 chr1:92930600-92939400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr1:92930800-92944400 Weak transcription Spleen Spleen
6 chr1:92933000-92939600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr1:92933000-92939800 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr1:92933400-92941200 Weak transcription Primary T cells from cord blood blood
9 chr1:92933600-92939400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr1:92933600-92939600 Weak transcription Primary hematopoietic stem cells blood
11 chr1:92933600-92939800 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr1:92936400-92940600 Weak transcription HepG2 liver
13 chr1:92936600-92940600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr1:92938000-92940800 Genic enhancers Dnd41 blood
15 chr1:92938200-92939800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr1:92938200-92940800 Genic enhancers Fetal Thymus thymus
17 chr1:92938600-92939600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:92938600-92940200 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:92938800-92939800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr1:92938800-92943800 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr1:92939000-92939400 Enhancers Primary T helper cells PMA-I stimulated --
22 chr1:92939000-92939800 Enhancers Thymus Thymus
23 chr1:92939000-92940000 Enhancers Primary T cells fromperipheralblood blood
24 chr1:92939000-92940600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:92939000-92941200 Enhancers Primary T regulatory cells fromperipheralblood blood
26 chr1:92939000-92944600 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr1:92939200-92939400 Enhancers HUES6 Cell Line embryonic stem cell
28 chr1:92939200-92939400 Enhancers Rectal Mucosa Donor 31 rectum
29 chr1:92939200-92942600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr1:92939200-92943600 Enhancers GM12878-XiMat blood

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Last update: Aug 31, 2015