Variant report

Variant	rs6704484
Chromosome Location	chr1:92885523-92885524
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 81 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs10159031	1.00[CEU][hapmap]
rs10399671	0.87[EUR][1000 genomes]
rs11166542	1.00[CEU][hapmap]
rs12075168	0.87[EUR][1000 genomes]
rs12075243	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12098095	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12563400	1.00[CEU][hapmap];1.00[TSI][hapmap]
rs12564911	1.00[CEU][hapmap]
rs12565259	1.00[CEU][hapmap]
rs12566527	1.00[CEU][hapmap]
rs17131621	1.00[CEU][hapmap]
rs17131632	0.87[EUR][1000 genomes]
rs17131636	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs41286805	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs41296171	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs41313389	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55993081	0.87[EUR][1000 genomes]
rs56172716	0.87[EUR][1000 genomes]
rs56297403	1.00[EUR][1000 genomes]
rs57177520	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57217458	1.00[EUR][1000 genomes]
rs57782462	0.87[EUR][1000 genomes]
rs58142139	1.00[EUR][1000 genomes]
rs59278612	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59459727	0.87[EUR][1000 genomes]
rs60265386	1.00[EUR][1000 genomes]
rs60550001	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60755573	1.00[EUR][1000 genomes]
rs60933677	1.00[EUR][1000 genomes]
rs61141829	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61185080	1.00[EUR][1000 genomes]
rs61410146	1.00[EUR][1000 genomes]
rs6661028	1.00[EUR][1000 genomes]
rs6662565	1.00[CEU][hapmap]
rs6672838	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs6679259	0.87[EUR][1000 genomes]
rs6681027	1.00[CEU][hapmap]
rs6681213	1.00[EUR][1000 genomes]
rs6683456	0.87[EUR][1000 genomes]
rs6685997	0.97[AFR][1000 genomes]
rs6695475	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs6702975	1.00[EUR][1000 genomes]
rs72958740	1.00[EUR][1000 genomes]
rs72958746	1.00[EUR][1000 genomes]
rs72958774	1.00[EUR][1000 genomes]
rs72958781	1.00[EUR][1000 genomes]
rs72958796	1.00[EUR][1000 genomes]
rs72960815	1.00[EUR][1000 genomes]
rs72960831	1.00[EUR][1000 genomes]
rs72960835	1.00[EUR][1000 genomes]
rs72960847	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72960860	1.00[EUR][1000 genomes]
rs72960870	1.00[EUR][1000 genomes]
rs72960872	0.87[EUR][1000 genomes]
rs72962640	1.00[EUR][1000 genomes]
rs72962659	0.87[EUR][1000 genomes]
rs74101123	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74101131	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74101133	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74101146	1.00[EUR][1000 genomes]
rs74101152	1.00[EUR][1000 genomes]
rs74101157	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74101184	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs74101186	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs74101190	0.87[EUR][1000 genomes]
rs74102844	1.00[EUR][1000 genomes]
rs74102853	1.00[EUR][1000 genomes]
rs74102861	1.00[EUR][1000 genomes]
rs74102906	0.87[EUR][1000 genomes]
rs74102948	0.87[EUR][1000 genomes]
rs74102953	0.87[EUR][1000 genomes]
rs7513631	1.00[EUR][1000 genomes]
rs7519603	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs7520555	1.00[CEU][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7520675	0.87[EUR][1000 genomes]
rs7525174	1.00[EUR][1000 genomes]
rs7527960	0.87[EUR][1000 genomes]
rs7529971	1.00[CEU][hapmap];1.00[MEX][hapmap];0.80[MKK][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7534750	1.00[EUR][1000 genomes]
rs7535171	1.00[CEU][hapmap]
rs7535181	1.00[CEU][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:92885000-92885600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr1:92885200-92885600	Enhancers	H1 Cell Line	embryonic stem cell
3	chr1:92885200-92885600	Enhancers	H9 Cell Line	embryonic stem cell
4	chr1:92885200-92885600	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr1:92885200-92885600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr1:92885200-92885600	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr1:92885200-92885800	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr1:92885200-92885800	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr1:92885400-92885600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr1:92885400-92885800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr1:92885400-92885800	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr1:92885400-92885800	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr1:92885400-92885800	Enhancers	Fetal Thymus	thymus

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