The 2.0 version of rSNPBase

Variant report

Variant rs6692060
Chromosome Location chr1:92846681-92846682
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92792800-92850800 Weak transcription Fetal Heart heart
3 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr1:92795200-92851400 Weak transcription Spleen Spleen
5 chr1:92798200-92846800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:92804400-92853200 Weak transcription NHEK skin
7 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:92816000-92851400 Weak transcription A549 lung
9 chr1:92816400-92846800 Weak transcription Primary monocytes fromperipheralblood blood
10 chr1:92817400-92851400 Weak transcription Rectal Smooth Muscle rectum
11 chr1:92818000-92851600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:92818000-92852600 Weak transcription Colon Smooth Muscle Colon
13 chr1:92818200-92851600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:92818800-92853000 Weak transcription Osteobl bone
15 chr1:92823600-92853200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:92824000-92851400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr1:92824400-92850200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:92824400-92851400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:92824400-92852400 Weak transcription Colonic Mucosa Colon
20 chr1:92824600-92850200 Weak transcription Fetal Brain Female brain
21 chr1:92824600-92851400 Weak transcription Brain Substantia Nigra brain
22 chr1:92824600-92851400 Weak transcription Placenta Placenta
23 chr1:92824600-92851400 Weak transcription NHDF-Ad bronchial
24 chr1:92825400-92849800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:92825400-92851400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:92825600-92851400 Weak transcription Fetal Kidney kidney
27 chr1:92825600-92852400 Weak transcription HepG2 liver
28 chr1:92825600-92852800 Weak transcription HMEC breast
29 chr1:92825800-92850200 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr1:92826000-92850400 Weak transcription Lung lung
31 chr1:92826000-92851400 Weak transcription HSMMtube muscle
32 chr1:92826000-92852600 Weak transcription Brain Anterior Caudate brain
33 chr1:92826200-92849400 Weak transcription Fetal Stomach stomach
34 chr1:92826200-92853000 Weak transcription Fetal Brain Male brain
35 chr1:92826600-92850200 Weak transcription Fetal Muscle Leg muscle
36 chr1:92830400-92849800 Weak transcription Fetal Intestine Small intestine
37 chr1:92830600-92851400 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:92833400-92855000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr1:92833400-92856000 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr1:92833600-92846800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:92833600-92852600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr1:92833600-92852800 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr1:92834000-92851400 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:92834400-92855200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:92835200-92846800 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:92835400-92855200 Weak transcription Hela-S3 cervix
47 chr1:92835600-92850800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr1:92835600-92851400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:92836200-92852400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:92836400-92851400 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015