The 2.0 version of rSNPBase

Variant report

Variant rs989653
Chromosome Location chr1:93003570-93003571
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92968200-93042800 Weak transcription HSMM muscle
2 chr1:92972600-93013400 Weak transcription Ovary ovary
3 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
4 chr1:92977600-93010600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:92981800-93004000 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr1:92981800-93033400 Weak transcription NHEK skin
8 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
9 chr1:92990800-93003800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr1:92993000-93003600 Weak transcription Fetal Intestine Small intestine
11 chr1:92993000-93007400 Weak transcription Left Ventricle heart
12 chr1:92993800-93003600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:92993800-93007200 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:92994600-93066000 Weak transcription Placenta Placenta
15 chr1:92999400-93016600 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr1:93001200-93003600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr1:93001400-93004000 Enhancers Primary T helper 17 cells PMA-I stimulated --
18 chr1:93001400-93024200 Weak transcription Psoas Muscle Psoas
19 chr1:93001600-93004600 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr1:93001600-93004600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr1:93001800-93004600 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr1:93001800-93004600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:93001800-93004600 Enhancers HepG2 liver
24 chr1:93001800-93004800 Enhancers HUVEC blood vessel
25 chr1:93002200-93003600 Enhancers Liver Liver
26 chr1:93002200-93004200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr1:93002200-93004400 Enhancers Primary hematopoietic stem cells blood
28 chr1:93002200-93004800 Enhancers NH-A brain
29 chr1:93002400-93003800 Enhancers Primary T helper naive cells fromperipheralblood blood
30 chr1:93002400-93003800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
31 chr1:93002400-93004000 Enhancers Primary T helper cells PMA-I stimulated --
32 chr1:93002400-93004800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:93002600-93003600 Weak transcription Fetal Intestine Large intestine
34 chr1:93002600-93003600 Enhancers Pancreatic Islets Pancreatic Islet
35 chr1:93002600-93003800 Enhancers Muscle Satellite Cultured Cells --
36 chr1:93002600-93004600 Enhancers Osteobl bone
37 chr1:93002800-93003600 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:93002800-93003600 Weak transcription Primary B cells from cord blood blood
39 chr1:93002800-93003600 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr1:93002800-93003600 Enhancers Primary T killer memory cells from peripheral blood blood
41 chr1:93002800-93003600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr1:93002800-93004000 Weak transcription Primary B cells from peripheral blood blood
43 chr1:93002800-93004000 Flanking Active TSS Primary T cells from cord blood blood
44 chr1:93002800-93004000 Weak transcription Fetal Thymus thymus
45 chr1:93002800-93004000 Weak transcription Thymus Thymus
46 chr1:93002800-93004800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr1:93002800-93007400 Weak transcription Primary monocytes fromperipheralblood blood
48 chr1:93003000-93003600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
49 chr1:93003400-93003800 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:93003400-93003800 Active TSS Primary Natural Killer cells fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015