The 2.0 version of rSNPBase

Variant report

Variant rs6668584
Chromosome Location chr1:93082581-93082582
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93014800-93100200 Weak transcription Right Ventricle heart
2 chr1:93026000-93091800 Weak transcription Hela-S3 cervix
3 chr1:93050600-93082600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr1:93052000-93119400 Weak transcription NHEK skin
5 chr1:93053600-93166200 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:93054800-93089200 Weak transcription HSMM muscle
7 chr1:93055000-93082600 Weak transcription Pancreas Pancrea
8 chr1:93055000-93083000 Weak transcription Fetal Lung lung
9 chr1:93055000-93100200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:93055200-93082600 Weak transcription Lung lung
11 chr1:93055800-93085200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:93062000-93118800 Weak transcription HMEC breast
13 chr1:93063000-93100600 Weak transcription Gastric stomach
14 chr1:93064400-93100800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:93064600-93083000 Weak transcription Osteobl bone
16 chr1:93065200-93101000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:93065200-93118600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:93065800-93119600 Weak transcription NH-A brain
19 chr1:93066800-93103000 Weak transcription NHDF-Ad bronchial
20 chr1:93066800-93114600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:93067000-93088400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr1:93067200-93101000 Weak transcription Rectal Smooth Muscle rectum
23 chr1:93067400-93100800 Weak transcription Brain Angular Gyrus brain
24 chr1:93068200-93100600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:93068600-93082800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:93068600-93082800 Weak transcription NHLF lung
27 chr1:93068600-93100400 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr1:93068600-93112600 Weak transcription Brain Substantia Nigra brain
29 chr1:93068800-93083200 Weak transcription Fetal Kidney kidney
30 chr1:93068800-93103200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:93069400-93104600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr1:93069600-93119600 Weak transcription Colon Smooth Muscle Colon
33 chr1:93070000-93083000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:93070000-93083600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr1:93070000-93100800 Weak transcription Brain Cingulate Gyrus brain
36 chr1:93070600-93082600 Weak transcription Adipose Nuclei Adipose
37 chr1:93070600-93100200 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:93070600-93100600 Weak transcription Colonic Mucosa Colon
39 chr1:93070600-93101000 Weak transcription Primary B cells from peripheral blood blood
40 chr1:93070800-93083400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:93070800-93100800 Weak transcription Brain Hippocampus Middle brain
42 chr1:93071000-93085600 Weak transcription Brain Anterior Caudate brain
43 chr1:93077200-93100600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:93078400-93096200 Weak transcription Fetal Heart heart
45 chr1:93080200-93100800 Weak transcription Esophagus oesophagus
46 chr1:93080600-93085200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:93080600-93085800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr1:93080600-93085800 Strong transcription Liver Liver
49 chr1:93080800-93084800 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:93080800-93092600 Strong transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015