The 2.0 version of rSNPBase

Variant report

Variant rs2025101
Chromosome Location chr1:93214572-93214573
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93190000-93221800 Weak transcription Rectal Smooth Muscle rectum
2 chr1:93190200-93220000 Weak transcription Fetal Muscle Leg muscle
3 chr1:93191200-93221600 Weak transcription Fetal Intestine Large intestine
4 chr1:93192400-93221200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:93192400-93226400 Weak transcription Esophagus oesophagus
6 chr1:93193000-93223800 Weak transcription Duodenum Mucosa Duodenum
7 chr1:93194600-93218000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr1:93195000-93218000 Weak transcription NHEK skin
9 chr1:93200200-93224000 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr1:93201000-93218200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr1:93201000-93218200 Weak transcription NH-A brain
12 chr1:93201000-93220000 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr1:93209200-93222400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr1:93209200-93227800 Weak transcription Primary B cells from cord blood blood
15 chr1:93210000-93218200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:93210000-93221200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:93211600-93217600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:93211800-93218400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:93211800-93218600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:93211800-93249200 Weak transcription Fetal Stomach stomach
21 chr1:93212400-93220000 Weak transcription Fetal Intestine Small intestine
22 chr1:93213600-93218000 Weak transcription Muscle Satellite Cultured Cells --
23 chr1:93213800-93217400 Weak transcription Right Ventricle heart
24 chr1:93213800-93218000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:93213800-93218000 Weak transcription Osteobl bone
26 chr1:93213800-93218200 Weak transcription Brain Anterior Caudate brain
27 chr1:93213800-93218200 Weak transcription Brain Cingulate Gyrus brain
28 chr1:93213800-93218200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr1:93213800-93221200 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:93213800-93221200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr1:93213800-93221200 Weak transcription Gastric stomach
32 chr1:93214000-93217800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:93214000-93218000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr1:93214000-93218200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr1:93214000-93218200 Weak transcription Brain Hippocampus Middle brain
36 chr1:93214000-93218400 Weak transcription K562 blood
37 chr1:93214000-93221200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:93214000-93221200 Weak transcription Placenta Placenta
39 chr1:93214000-93224200 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr1:93214000-93224600 Weak transcription Psoas Muscle Psoas
41 chr1:93214000-93231200 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:93214000-93240000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:93214000-93248400 Weak transcription Lung lung
44 chr1:93214200-93218000 Weak transcription NHLF lung
45 chr1:93214200-93221200 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015