The 2.0 version of rSNPBase

Variant report

Variant rs6676454
Chromosome Location chr1:93225271-93225272
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93192400-93226400 Weak transcription Esophagus oesophagus
2 chr1:93209200-93227800 Weak transcription Primary B cells from cord blood blood
3 chr1:93211800-93249200 Weak transcription Fetal Stomach stomach
4 chr1:93214000-93231200 Weak transcription Primary monocytes fromperipheralblood blood
5 chr1:93214000-93240000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:93214000-93248400 Weak transcription Lung lung
7 chr1:93219800-93225600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:93220200-93227600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr1:93220400-93225800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:93220400-93232800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:93221400-93233800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:93222000-93248000 Weak transcription HSMMtube muscle
13 chr1:93222400-93230000 Weak transcription NHEK skin
14 chr1:93222400-93233800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:93222400-93234000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:93222400-93240600 Weak transcription Left Ventricle heart
17 chr1:93222400-93248200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:93222400-93248200 Weak transcription Fetal Intestine Large intestine
19 chr1:93222400-93248400 Weak transcription Placenta Placenta
20 chr1:93222600-93231000 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr1:93222600-93232600 Weak transcription Gastric stomach
22 chr1:93222600-93246800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:93222800-93227000 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr1:93222800-93233800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr1:93224200-93225600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:93224400-93225600 Enhancers Muscle Satellite Cultured Cells --
27 chr1:93224400-93226000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:93224600-93225600 Enhancers Osteobl bone
29 chr1:93224800-93225400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:93224800-93225600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:93224800-93234000 Weak transcription Fetal Intestine Small intestine
32 chr1:93224800-93234000 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015