The 2.0 version of rSNPBase

Variant report

Variant rs11164773
Chromosome Location chr1:93012247-93012248
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92968200-93042800 Weak transcription HSMM muscle
2 chr1:92972600-93013400 Weak transcription Ovary ovary
3 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
4 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:92981800-93033400 Weak transcription NHEK skin
6 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
7 chr1:92994600-93066000 Weak transcription Placenta Placenta
8 chr1:92999400-93016600 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:93001400-93024200 Weak transcription Psoas Muscle Psoas
10 chr1:93004400-93012400 Weak transcription Fetal Kidney kidney
11 chr1:93004400-93012600 Weak transcription Fetal Intestine Large intestine
12 chr1:93004400-93022200 Weak transcription Pancreas Pancrea
13 chr1:93004400-93028400 Weak transcription Primary B cells from cord blood blood
14 chr1:93004400-93032400 Weak transcription Fetal Intestine Small intestine
15 chr1:93004400-93033000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:93004400-93042200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:93004400-93042400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:93004400-93070000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:93005000-93021600 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:93007000-93014000 Weak transcription Aorta Aorta
21 chr1:93007400-93021400 Weak transcription Stomach Smooth Muscle stomach
22 chr1:93007800-93042600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:93009600-93017200 Weak transcription Brain Hippocampus Middle brain
24 chr1:93009600-93023800 Weak transcription Liver Liver
25 chr1:93009800-93028200 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:93009800-93029200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr1:93012000-93042800 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015