The 2.0 version of rSNPBase

Variant report

Variant rs11164780
Chromosome Location chr1:93044029-93044030
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
2 chr1:92994600-93066000 Weak transcription Placenta Placenta
3 chr1:93004400-93070000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr1:93014800-93053000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr1:93014800-93100200 Weak transcription Right Ventricle heart
6 chr1:93017000-93066000 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:93018600-93054600 Weak transcription Lung lung
8 chr1:93024200-93056000 Weak transcription Fetal Heart heart
9 chr1:93026000-93091800 Weak transcription Hela-S3 cervix
10 chr1:93027400-93066000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:93029400-93046000 Weak transcription Primary B cells from cord blood blood
12 chr1:93030000-93054600 Weak transcription Aorta Aorta
13 chr1:93030000-93082200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr1:93032000-93054400 Weak transcription Fetal Lung lung
15 chr1:93033400-93049800 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:93034000-93049600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:93034000-93054600 Weak transcription Fetal Intestine Small intestine
18 chr1:93034400-93081000 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr1:93034600-93048800 Weak transcription HMEC breast
20 chr1:93034800-93047600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:93035400-93049400 Weak transcription HSMMtube muscle
22 chr1:93040400-93046600 Weak transcription Fetal Intestine Large intestine
23 chr1:93040400-93050800 Weak transcription Gastric stomach
24 chr1:93041400-93054400 Weak transcription Fetal Muscle Leg muscle
25 chr1:93041400-93054600 Weak transcription Pancreas Pancrea
26 chr1:93041600-93059000 Weak transcription Brain Angular Gyrus brain
27 chr1:93042200-93044800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr1:93042400-93044600 Enhancers NHEK skin
29 chr1:93043000-93045200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:93043000-93045600 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr1:93043200-93045800 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr1:93043200-93046200 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr1:93043200-93049400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr1:93043200-93049600 Weak transcription Brain Cingulate Gyrus brain
35 chr1:93043200-93054400 Weak transcription Left Ventricle heart
36 chr1:93043200-93070000 Weak transcription Primary B cells from peripheral blood blood
37 chr1:93043400-93044200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr1:93043400-93046000 Weak transcription HSMM muscle
39 chr1:93043400-93049200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:93043400-93054600 Weak transcription Fetal Stomach stomach
41 chr1:93043600-93046200 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:93043600-93048600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:93043600-93049400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr1:93043800-93044400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr1:93043800-93045200 Weak transcription Osteobl bone
46 chr1:93043800-93045400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:93043800-93046000 Weak transcription Liver Liver
48 chr1:93043800-93046600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr1:93043800-93048400 Weak transcription NH-A brain
50 chr1:93043800-93049200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015