The 2.0 version of rSNPBase

Variant report

Variant rs6665121
Chromosome Location chr1:93242284-93242285
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93211800-93249200 Weak transcription Fetal Stomach stomach
2 chr1:93214000-93248400 Weak transcription Lung lung
3 chr1:93222000-93248000 Weak transcription HSMMtube muscle
4 chr1:93222400-93248200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:93222400-93248200 Weak transcription Fetal Intestine Large intestine
6 chr1:93222400-93248400 Weak transcription Placenta Placenta
7 chr1:93222600-93246800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:93225600-93248000 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:93226000-93249200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:93231600-93248000 Weak transcription Adipose Nuclei Adipose
11 chr1:93234400-93245000 Weak transcription Fetal Intestine Small intestine
12 chr1:93234400-93248000 Weak transcription Primary monocytes fromperipheralblood blood
13 chr1:93234600-93243200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:93234600-93248000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:93234800-93248200 Weak transcription Primary B cells from cord blood blood
16 chr1:93234800-93249200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:93235000-93248200 Weak transcription NHLF lung
18 chr1:93235200-93245600 Weak transcription Right Ventricle heart
19 chr1:93235200-93247200 Weak transcription NHEK skin
20 chr1:93235600-93248000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:93236200-93247800 Weak transcription Hela-S3 cervix
22 chr1:93237000-93246200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:93237200-93243800 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr1:93238800-93246800 Weak transcription Gastric stomach
25 chr1:93239200-93243200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:93239600-93249400 Weak transcription Ovary ovary
27 chr1:93240200-93247200 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:93240200-93248400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:93240600-93249400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:93240600-93249400 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:93240800-93248000 Weak transcription K562 blood
32 chr1:93240800-93248400 Weak transcription Pancreas Pancrea
33 chr1:93240800-93248800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:93240800-93249600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:93241000-93243600 Weak transcription Right Atrium heart
36 chr1:93241000-93245600 Weak transcription HepG2 liver
37 chr1:93241000-93247200 Weak transcription Left Ventricle heart
38 chr1:93241000-93249400 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr1:93241000-93249400 Weak transcription Brain Angular Gyrus brain
40 chr1:93241200-93243000 Weak transcription Brain Hippocampus Middle brain
41 chr1:93241200-93244200 Weak transcription Stomach Mucosa stomach
42 chr1:93241200-93247800 Weak transcription Brain Cingulate Gyrus brain
43 chr1:93241200-93248000 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:93241200-93248200 Weak transcription Brain Substantia Nigra brain
45 chr1:93241200-93249400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr1:93241400-93248600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr1:93241600-93248600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015