The 2.0 version of rSNPBase

Variant report

Variant rs7515478
Chromosome Location chr1:93069533-93069534
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93004400-93070000 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr1:93014800-93100200 Weak transcription Right Ventricle heart
3 chr1:93026000-93091800 Weak transcription Hela-S3 cervix
4 chr1:93030000-93082200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:93034400-93081000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:93043200-93070000 Weak transcription Primary B cells from peripheral blood blood
7 chr1:93045800-93070000 Weak transcription Duodenum Mucosa Duodenum
8 chr1:93046800-93070200 Weak transcription Brain Anterior Caudate brain
9 chr1:93050200-93081200 Weak transcription HSMMtube muscle
10 chr1:93050600-93082400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr1:93050600-93082600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr1:93051800-93082000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr1:93052000-93069800 Weak transcription Liver Liver
14 chr1:93052000-93070000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:93052000-93119400 Weak transcription NHEK skin
16 chr1:93053200-93070000 Weak transcription Colonic Mucosa Colon
17 chr1:93053600-93166200 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:93054800-93089200 Weak transcription HSMM muscle
19 chr1:93055000-93080800 Weak transcription Aorta Aorta
20 chr1:93055000-93082600 Weak transcription Pancreas Pancrea
21 chr1:93055000-93083000 Weak transcription Fetal Lung lung
22 chr1:93055000-93100200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:93055200-93069800 Weak transcription Ovary ovary
24 chr1:93055200-93082600 Weak transcription Lung lung
25 chr1:93055800-93069600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:93055800-93081000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:93055800-93082200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:93055800-93082200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:93055800-93085200 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:93061800-93081200 Weak transcription Fetal Muscle Leg muscle
31 chr1:93062000-93118800 Weak transcription HMEC breast
32 chr1:93063000-93100600 Weak transcription Gastric stomach
33 chr1:93064400-93100800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:93064600-93071600 Weak transcription Small Intestine intestine
35 chr1:93064600-93083000 Weak transcription Osteobl bone
36 chr1:93065200-93101000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:93065200-93118600 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:93065800-93119600 Weak transcription NH-A brain
39 chr1:93066600-93070200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:93066800-93069800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:93066800-93103000 Weak transcription NHDF-Ad bronchial
42 chr1:93066800-93114600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:93067000-93069600 Weak transcription Primary monocytes fromperipheralblood blood
44 chr1:93067000-93080600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr1:93067000-93088400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:93067200-93069800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:93067200-93070000 Weak transcription Monocytes-CD14+_RO01746 blood
48 chr1:93067200-93101000 Weak transcription Rectal Smooth Muscle rectum
49 chr1:93067400-93100800 Weak transcription Brain Angular Gyrus brain
50 chr1:93067600-93071200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015