Variant report

Variant	rs6604000
Chromosome Location	chr1:93101293-93101294
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 245 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:242)

rs_ID	r²[population]
rs1017008	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10218567	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10218571	0.84[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10218670	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1034219	0.89[ASN][1000 genomes]
rs10465754	0.89[ASN][1000 genomes]
rs10465756	0.81[ASN][1000 genomes]
rs10735778	0.89[ASN][1000 genomes]
rs10735779	0.89[ASN][1000 genomes]
rs10735782	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10735783	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10735784	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10747444	0.89[ASN][1000 genomes]
rs10747445	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10747447	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10747448	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10747449	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10747450	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10747451	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10747452	0.85[EUR][1000 genomes]
rs10782935	0.89[ASN][1000 genomes]
rs10782938	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10782940	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10782942	0.95[EUR][1000 genomes]
rs10874712	0.89[ASN][1000 genomes]
rs10874715	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10874716	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10874721	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10874728	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10874729	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10874730	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10874731	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11164773	0.89[ASN][1000 genomes]
rs11164778	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164780	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11164790	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11164799	0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164804	0.95[EUR][1000 genomes]
rs11164805	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164806	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164808	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164809	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11164812	0.93[EUR][1000 genomes]
rs11164813	0.93[EUR][1000 genomes]
rs1182632	0.88[EUR][1000 genomes]
rs1182633	0.88[EUR][1000 genomes]
rs1182636	0.88[EUR][1000 genomes]
rs1182639	0.88[EUR][1000 genomes]
rs1182640	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12029026	0.88[EUR][1000 genomes]
rs12030613	0.87[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12045019	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12046739	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1337108	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1337109	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1408916	0.89[ASN][1000 genomes]
rs1411706	0.82[EUR][1000 genomes]
rs1415294	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1415295	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1537498	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1538029	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1556562	0.89[ASN][1000 genomes]
rs1556563	0.89[ASN][1000 genomes]
rs1556564	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1556565	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1570837	0.89[ASN][1000 genomes]
rs1610319	0.84[EUR][1000 genomes]
rs1932965	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1932966	0.87[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1932967	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1977224	0.84[EUR][1000 genomes]
rs1999819	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2008797	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2025101	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2027059	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2027060	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2039451	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2039452	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2039453	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2050597	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2065916	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2065917	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2077529	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2095265	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2095266	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2095267	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2095268	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2097838	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2107520	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2107521	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2151577	0.89[ASN][1000 genomes]
rs2158446	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2180977	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2184193	0.81[ASN][1000 genomes]
rs2244496	0.83[EUR][1000 genomes]
rs2298912	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2391160	0.89[ASN][1000 genomes]
rs2391164	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2391193	0.80[EUR][1000 genomes]
rs2391194	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2391196	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2391199	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2391200	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2391201	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2811599	0.83[EUR][1000 genomes]
rs2811602	0.82[EUR][1000 genomes]
rs2893217	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35054144	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3790445	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3790446	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3898498	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3898499	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3928821	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3936946	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4000726	0.83[AFR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4000727	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4098278	0.83[EUR][1000 genomes]
rs4120650	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4264007	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4417075	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4525050	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4526624	0.84[AFR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4568842	0.89[ASN][1000 genomes]
rs4638137	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4642893	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4847181	0.89[ASN][1000 genomes]
rs4847217	0.95[EUR][1000 genomes]
rs4847232	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847234	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4847247	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4847266	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4847280	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847285	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847304	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847305	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847309	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847310	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4847327	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847363	0.95[EUR][1000 genomes]
rs4847370	0.93[EUR][1000 genomes]
rs4847377	0.89[ASN][1000 genomes]
rs4847400	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4847427	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4970701	0.89[ASN][1000 genomes]
rs4970712	0.89[ASN][1000 genomes]
rs6422512	0.89[ASN][1000 genomes]
rs6422513	0.89[ASN][1000 genomes]
rs6422515	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6603981	0.89[ASN][1000 genomes]
rs6603982	0.89[ASN][1000 genomes]
rs6603984	0.89[ASN][1000 genomes]
rs6603985	0.89[ASN][1000 genomes]
rs6603987	0.89[ASN][1000 genomes]
rs6603988	0.89[ASN][1000 genomes]
rs6603990	0.89[ASN][1000 genomes]
rs6603993	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6603994	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6603999	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6604003	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6604004	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6604006	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6604010	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6604012	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6604015	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6604018	0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6604022	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6656432	0.89[ASN][1000 genomes]
rs6658232	0.91[EUR][1000 genomes]
rs6660296	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6661134	0.89[ASN][1000 genomes]
rs6661600	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6665121	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6665579	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6668283	0.90[EUR][1000 genomes]
rs6668584	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6669914	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6671114	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6671421	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6675246	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6676454	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6678864	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6679839	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6685705	0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6687803	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6691038	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6692187	0.89[ASN][1000 genomes]
rs6693371	0.93[EUR][1000 genomes]
rs6696173	0.89[ASN][1000 genomes]
rs6696636	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6701130	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6702031	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6703467	0.85[EUR][1000 genomes]
rs6704249	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs723909	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7416169	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7513624	0.80[EUR][1000 genomes]
rs7513815	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7514716	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7515478	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7515577	0.89[ASN][1000 genomes]
rs7515866	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7516141	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7516537	0.94[EUR][1000 genomes]
rs7519694	0.91[AFR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7521345	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7526582	0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7527835	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7529332	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7529630	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7532731	0.82[EUR][1000 genomes]
rs7538520	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7540407	0.91[AFR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7543327	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7543964	0.93[EUR][1000 genomes]
rs7545318	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7549844	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7551340	0.85[EUR][1000 genomes]
rs7551880	0.93[EUR][1000 genomes]
rs7552085	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7553367	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7554183	0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7554868	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7556243	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs757469	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs914064	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs914966	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs927339	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs932637	0.83[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9439917	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9439920	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9439924	0.93[EUR][1000 genomes]
rs945724	0.91[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs963043	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs963044	1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9633481	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9651256	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9661812	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9699810	0.83[AFR][1000 genomes];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs976208	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs976209	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs980940	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs989653	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830603	chr1:93003657-93172206	Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv1794348	chr1:93090476-93192932	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv1802611	chr1:93090476-93219907	Active TSS Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:93052000-93119400	Weak transcription	NHEK	skin
2	chr1:93053600-93166200	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr1:93062000-93118800	Weak transcription	HMEC	breast
4	chr1:93065200-93118600	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr1:93065800-93119600	Weak transcription	NH-A	brain
6	chr1:93066800-93103000	Weak transcription	NHDF-Ad	bronchial
7	chr1:93066800-93114600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:93068600-93112600	Weak transcription	Brain Substantia Nigra	brain
9	chr1:93068800-93103200	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr1:93069400-93104600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr1:93069600-93119600	Weak transcription	Colon Smooth Muscle	Colon
12	chr1:93082600-93108600	Weak transcription	Psoas Muscle	Psoas
13	chr1:93083600-93106400	Weak transcription	Pancreas	Pancrea
14	chr1:93084200-93104000	Weak transcription	Spleen	Spleen
15	chr1:93089800-93114200	Weak transcription	HSMM	muscle
16	chr1:93090000-93101400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr1:93098400-93205400	Weak transcription	NHLF	lung
18	chr1:93100000-93101400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr1:93100000-93101800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr1:93100200-93101400	ZNF genes & repeats	Fetal Intestine Small	intestine
21	chr1:93100200-93101400	Strong transcription	Right Ventricle	heart
22	chr1:93100200-93101600	Strong transcription	Fetal Muscle Trunk	muscle
23	chr1:93100200-93101600	Strong transcription	Rectal Mucosa Donor 29	rectum
24	chr1:93100200-93101800	Strong transcription	Muscle Satellite Cultured Cells	--
25	chr1:93100200-93102000	Strong transcription	Adipose Nuclei	Adipose
26	chr1:93100200-93102000	Strong transcription	Fetal Intestine Large	intestine
27	chr1:93100200-93102000	Strong transcription	Fetal Lung	lung
28	chr1:93100200-93102000	Strong transcription	Placenta	Placenta
29	chr1:93100400-93101400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr1:93100400-93101400	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
31	chr1:93100400-93101600	Strong transcription	Primary neutrophils fromperipheralblood	blood
32	chr1:93100400-93101600	Strong transcription	Monocytes-CD14+_RO01746	blood
33	chr1:93100400-93102000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
34	chr1:93100400-93102000	Strong transcription	Rectal Mucosa Donor 31	rectum
35	chr1:93100600-93101400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr1:93100600-93101400	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr1:93100600-93101400	Strong transcription	Foreskin Melanocyte Primary Cells skin01	Skin
38	chr1:93100600-93101400	Strong transcription	Gastric	stomach
39	chr1:93100600-93101400	Strong transcription	Lung	lung
40	chr1:93100600-93101600	Strong transcription	Colonic Mucosa	Colon
41	chr1:93100600-93102000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr1:93100600-93102000	Strong transcription	Liver	Liver
43	chr1:93100600-93102200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr1:93100600-93118600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
45	chr1:93100800-93101400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
46	chr1:93100800-93101400	Active TSS	HUES6 Cell Line	embryonic stem cell
47	chr1:93100800-93101400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
48	chr1:93100800-93101400	Strong transcription	Brain Cingulate Gyrus	brain
49	chr1:93100800-93101400	ZNF genes & repeats	Fetal Stomach	stomach
50	chr1:93100800-93101400	Strong transcription	Left Ventricle	heart

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