Variant report

Variant	rs6941542
Chromosome Location	chr6:15802459-15802460
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:15793143..15797186-chr6:15800762..15804369,3	K562	blood:
2	chr6:15800944..15803032-chr6:16138888..16140630,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11751408	0.96[ASN][1000 genomes]
rs12110659	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13198914	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13207279	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13211098	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13219486	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17477477	0.96[ASN][1000 genomes]
rs190084	0.95[EUR][1000 genomes]
rs191986	0.85[ASN][1000 genomes]
rs2007855	0.85[ASN][1000 genomes]
rs220887	0.92[ASN][1000 genomes]
rs373949	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs374814	0.81[ASN][1000 genomes]
rs387725	0.94[EUR][1000 genomes]
rs387816	0.96[EUR][1000 genomes]
rs426166	0.97[EUR][1000 genomes]
rs4348320	1.00[ASN][1000 genomes]
rs552546	0.97[EUR][1000 genomes]
rs62394862	0.96[ASN][1000 genomes]
rs62396773	0.85[ASN][1000 genomes]
rs6908590	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6914658	0.95[EUR][1000 genomes]
rs6937161	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9464828	0.85[ASN][1000 genomes]
rs9464833	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476930	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9476932	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9476936	0.82[ASN][1000 genomes]
rs9476940	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476941	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15800400-15816200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:15801600-15802800	Weak transcription	Fetal Kidney	kidney
3	chr6:15801800-15803400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:15802200-15802800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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