Variant report

Variant	rs9464833
Chromosome Location	chr6:15811949-15811950
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:15811610..15813493-chr6:15816696..15819123,2	K562	blood:
2	chr6:15811055..15813493-chr6:15816451..15819123,2	K562	blood:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs11751408	0.96[ASN][1000 genomes]
rs12110659	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13198914	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13207279	0.80[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs13211098	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13219486	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17477477	0.96[ASN][1000 genomes]
rs190084	0.96[EUR][1000 genomes]
rs191986	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2007855	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs220887	0.92[ASN][1000 genomes]
rs220896	0.86[CHB][hapmap]
rs373949	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs374814	0.81[ASN][1000 genomes]
rs387725	0.93[EUR][1000 genomes]
rs387816	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs398785	0.86[CHB][hapmap]
rs420350	0.86[CHB][hapmap]
rs426166	0.96[EUR][1000 genomes]
rs4348320	1.00[ASN][1000 genomes]
rs552546	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs62394862	0.96[ASN][1000 genomes]
rs62396773	0.85[ASN][1000 genomes]
rs6908590	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6914658	0.94[EUR][1000 genomes]
rs6925310	0.82[CEU][hapmap]
rs6937161	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6941542	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74111	0.82[CEU][hapmap];1.00[CHB][hapmap]
rs9464820	0.86[CHB][hapmap]
rs9464821	0.82[CHB][hapmap]
rs9464828	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9464829	0.82[CEU][hapmap]
rs9476904	0.86[CHB][hapmap]
rs9476913	0.86[CHB][hapmap]
rs9476930	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9476932	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9476936	0.82[ASN][1000 genomes]
rs9476940	1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9476941	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs990062	0.86[CHB][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15800400-15816200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:15809800-15814800	Enhancers	Fetal Brain Male	brain
3	chr6:15810800-15812800	Weak transcription	Pancreatic Islets	Pancreatic Islet

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links