The 2.0 version of rSNPBase

Variant report

Variant rs704798
Chromosome Location chr7:98992253-98992254
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:98979400-99001800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:98980400-99003800 Strong transcription Primary hematopoietic stem cells short term culture blood
3 chr7:98980800-99000600 Strong transcription Dnd41 blood
4 chr7:98981000-98993000 Strong transcription A549 lung
5 chr7:98985600-99003800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr7:98987000-99004200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr7:98990000-99002800 Strong transcription GM12878-XiMat blood
8 chr7:98990200-98994600 Weak transcription NHDF-Ad bronchial
9 chr7:98990800-98992400 Weak transcription Hela-S3 cervix
10 chr7:98991000-98993200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr7:98991000-98995000 Weak transcription Aorta Aorta
12 chr7:98991000-98996200 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr7:98991000-99001600 Strong transcription Muscle Satellite Cultured Cells --
14 chr7:98991000-99001600 Strong transcription Osteobl bone
15 chr7:98991000-99002000 Strong transcription NHEK skin
16 chr7:98991000-99002600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr7:98991000-99002600 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr7:98991200-98993800 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
19 chr7:98991200-98996400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr7:98991200-98996600 Strong transcription HSMM muscle
21 chr7:98991400-98992400 Weak transcription Brain Anterior Caudate brain
22 chr7:98991400-98993600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr7:98991400-98994200 Weak transcription Ovary ovary
24 chr7:98991400-98995400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr7:98991400-99001800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr7:98991400-99001800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr7:98991400-99001800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr7:98991400-99002400 Strong transcription Esophagus oesophagus
29 chr7:98991400-99002400 Weak transcription Right Atrium heart
30 chr7:98991400-99004200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr7:98991600-98992400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr7:98991600-98992400 ZNF genes & repeats Thymus Thymus
33 chr7:98991600-98992600 Weak transcription Brain Cingulate Gyrus brain
34 chr7:98991600-98992600 Weak transcription Colon Smooth Muscle Colon
35 chr7:98991600-98993200 Weak transcription Brain Angular Gyrus brain
36 chr7:98991600-98993200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr7:98991600-98993400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr7:98991600-98993800 Strong transcription Rectal Smooth Muscle rectum
39 chr7:98991600-98994600 Strong transcription Primary T killer naive cells fromperipheralblood blood
40 chr7:98991600-98995400 Strong transcription NH-A brain
41 chr7:98991600-98996200 Strong transcription HMEC breast
42 chr7:98991600-98996400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr7:98991600-98997200 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr7:98991600-98999000 Strong transcription Primary B cells from cord blood blood
45 chr7:98991600-99001400 Strong transcription Placenta Placenta
46 chr7:98991600-99001600 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr7:98991600-99001800 Strong transcription NHLF lung
48 chr7:98991600-99002000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr7:98991600-99002000 Strong transcription Adipose Nuclei Adipose
50 chr7:98991600-99002400 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015